XLOC_026716


Basic Information

Item Value
gene id XLOC_026716
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 45539786 ~ 45543451 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00053102
AATTTCTAATAGTTGGAATCTCTTTATTGAATTCAAAGTGCACGCAGCCACAcacgtgcatgcacacacacacacacacacgcacaccataTACACCATTACTGGAGTCACAAAAGAGACGGAGAGTTGCTGACAGTATCACATTCTTGAGCATGTTTGAAGGGGCGCAGTAATATCAGTGTTTGCGGCGTGTTTCAGCAGGCTTTGGCCTTCATTCGTTTGCGAGTGGCTCATTTCTGGTGGCTTTCACTCAGCAGGAGGTGAACAGCACATGAGAAGTGTGAAGGTCAGAAGaagaagagagagggagagatgctGgACAACagtgaaaaatacatttaaaagtgttTGCATTTGAAGAGTGAACATAGTACAACAGG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00053102 True 380 lncRNA 0.44 2 45539786 45543451

Neighbor

gene id symbol gene type direction distance location
XLOC_026715 il21r.1 coding downstream 178213 45343782 ~ 45361573 (-)
XLOC_026714 il21r.2 coding downstream 212889 45315477 ~ 45326897 (-)
XLOC_026713 pdpk1a coding downstream 231392 45283391 ~ 45308394 (-)
XLOC_026712 kctd5a coding downstream 258436 45261387 ~ 45281350 (-)
XLOC_026711 usp31 coding downstream 288862 45195219 ~ 45250924 (-)
XLOC_026717 h3f3b.1 coding upstream 232919 45776370 ~ 45778123 (-)
XLOC_026718 si:ch211-66h3.4 coding upstream 275175 45818626 ~ 45822914 (-)
XLOC_026719 NA coding upstream 288626 45832077 ~ 45843700 (-)
XLOC_026720 igfals coding upstream 301556 45845007 ~ 45848257 (-)
XLOC_026721 shisa9b coding upstream 499955 46043406 ~ 46115232 (-)
XLOC_026709 NA non-coding downstream 1203933 44332747 ~ 44335853 (-)
XLOC_026708 NA non-coding downstream 1415416 44111545 ~ 44124370 (-)
XLOC_026703 BX682557.1 non-coding downstream 1650343 43878456 ~ 43889443 (-)
XLOC_026702 BX682557.2 non-coding downstream 1664657 43866785 ~ 43875129 (-)
XLOC_026695 NA non-coding downstream 2350701 43187194 ~ 43189085 (-)
XLOC_026722 NA non-coding upstream 609676 46153127 ~ 46217473 (-)
XLOC_026723 CR450782.1 non-coding upstream 681138 46224589 ~ 46227010 (-)
XLOC_026726 NA non-coding upstream 919134 46462585 ~ 46463256 (-)
XLOC_026727 CR385086.1 non-coding upstream 1214160 46757611 ~ 46762706 (-)

Expression


Co-expression Network