XLOC_026754


Basic Information

Item Value
gene id XLOC_026754
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 49406158 ~ 49418345 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00053124
gtgtaatacatgGAAATGTAGCAGTCAAATAAGGCACATGATAAATATCAGCTACAGAAAAATCATTGAATTTCACTTCAGTCAGTCACTTACTCAAGATAAAAGAACAGTATCCCTTAATTCACTTTATGGCATTAGTCATTTCTCCATTCGTGGCTATTAAAATAGAATGACCTGTCATAAATACATTAGAGTGTCTCAATGTGCTACAGTCAGTTTTTCGTACATCAATATATTAAGACTTGCTGTATATTTATacagattttatttgatttaaaaacatcTCGATCTTGTCAGTGCTACAGGACGAAGGGCAGGATTGGTGAGCGCAGTGTGGGGTACTCCTTGAACTCCTTTAGGTAACTGCGATGCTTTCCTTTGGCCCAGACCGTCATCTGGATGAATCCCACCACGGTGAAGAACAAGACAGGCACACACTGGGTCATGAGCGTGAATCCAAGCCAAGATCCCACCTTTCCCCATGCGATCTGGGCTCCCAAGTCTCTAAAGTAGAAGGTTGCAGTGGTTCCCACAGGAAGCTCCTGAAGGATATCTTCATCTTTTAGGGGTTTTCCTtctgaaataattataaaaacacttTGATATCTAACAGGAATACACAATTATCTTCTACTTAAAAGTTG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00053124 True 644 lncRNA 0.39 2 49406158 49418345

Neighbor

gene id symbol gene type direction distance location
XLOC_026753 si:ch73-167f10.1 coding downstream 23262 49379774 ~ 49382896 (-)
XLOC_026752 NA coding downstream 33482 49186398 ~ 49372676 (-)
XLOC_026751 dnajb1a coding downstream 242475 49150822 ~ 49163683 (-)
XLOC_026750 gipc1 coding downstream 268154 49126103 ~ 49138004 (-)
XLOC_026749 trim35-12 coding downstream 295448 49103210 ~ 49110710 (-)
XLOC_026755 samd1a coding upstream 7448 49425793 ~ 49447949 (-)
XLOC_026756 prkacaa coding upstream 41483 49459828 ~ 49504023 (-)
XLOC_026757 asf1ba coding upstream 86574 49504919 ~ 49514874 (-)
XLOC_026758 CR847534.1 coding upstream 133235 49551580 ~ 49554912 (-)
XLOC_026759 zgc:153426 coding upstream 140916 49559261 ~ 49566364 (-)
XLOC_026748 BX784040.1 non-coding downstream 328279 49077762 ~ 49077879 (-)
XLOC_026747 NA non-coding downstream 369376 49023900 ~ 49036782 (-)
XLOC_026745 NA non-coding downstream 404865 48999903 ~ 49001293 (-)
XLOC_026739 NA non-coding downstream 932404 48461497 ~ 48473754 (-)
XLOC_026761 NA non-coding upstream 516291 49934636 ~ 49937735 (-)
XLOC_026769 NA non-coding upstream 920435 50338780 ~ 50341046 (-)
XLOC_026770 NA non-coding upstream 1015206 50433551 ~ 50438278 (-)
XLOC_026771 NA non-coding upstream 1015448 50433793 ~ 50434423 (-)
XLOC_026773 CR812464.1 non-coding upstream 1310514 50728859 ~ 50749116 (-)

Expression


Co-expression Network