XLOC_000027 (n6amt1)


Basic Information

Item Value
gene id XLOC_000027
gene name n6amt1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 961607 ~ 970951 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00000059
AGTGAAGGATGCGAGTCCACGCTGTGTTGTTTGAAAATCATGTTTGAGGAGCTAAGAGGATGCTGATCGTGTGTCCAGATGTTTGAAATCAGCTTTATTTGATGGAGCGACTGGGCAGAAGCGAAGCTCACGTGTTCGGGCAGATTTATAGACTTCATTAAGACACTGCCTTGCTGTGGTGATGTTCCCGACTCCTCTGTATGCTCCGGCCGGTCGCGGCCGCTTTTCGGAGGTGTATGAACCGGCCGAGGACTCGTTTCTCCTGATGGACGCTCTGGAGAAAGACGCAGATCGGCTGAAGGACAGCAGgCCATGTGTGTGTCTGGAGGTTGGCAGCGGCTCCGGTGTGATCTCAGCCTTCCTCGCGTCTTTACTCGGCGCTCAGGCCTTATATATctGTACAGATGTGAATGCGGATGCGGCTCAGTGTTCAATGCAGACGTCTATCCTCAATAACCTGCATGTGCAGCCTGTCGTCACTGACCTGGTCGAGTGTCTTCTGCCCAGGTTGAATGGAAAAGTGGATGTGCTTGTTTTCAATCCGCCGTATGTGGTCACGCCGTCAGAAGAGgtgggCAGTCATGGTGTGGAGGCGTCGTGGGCCGGTGGTCTCCACGGTCGAGAAGTGATGAACCGCTTTTTCCCCATGATTCCTGATCTGATGTCTGAGCATGGGCTGTTTTACCTGGTCACCGTGTCTGATAATGATCCCGAGGGGATTGTGGATCTGCTGGCTCGCTCTGGTCTGGATGGACACGTGTGTTTGACTCGTCAGGCCGGACGAGAGACGCTCACCATCCTCAGATTCAGTAAAACAGCGGAAAAAACACAGATTCATTAAAAACGAAGACTTTTCTGTCTCTTAAGTCTGCAGATTATGAAAACACATGATTCCTGGACACTCCTCAGACTGTGATAAACATCGTCTTCTGTGTGTTTTCTCATGAACACTCTTGACTGTGTTTTTGAGCCATCTATTGACTCACTGAACTCAGTTACCCAGAATCCCACTCTCATCCCTCAAACGAGCTGTTTTTGAAAGGGCAGTACTGCAATGTCGACTTTCATCATTTCAGACTCCTTTTTTCCCCCAAGAATTCTACAGAatatcttgtttgtttgtttttttttacaacaagaAATAAAATCATCAAAGTTT

Function

symbol description
n6amt1 Predicted to enable S-adenosylmethionine-dependent methyltransferase activity and protein methyltransferase activity. Predicted to act upstream of or within methylation. Predicted to be part of eRF1 methyltransferase complex. Orthologous to human N6AMT1 (N-6 adenine-specific DNA methyltransferase 1).

GO:

id name namespace
GO:0032259 methylation biological_process
GO:0035657 eRF1 methyltransferase complex cellular_component
GO:0008757 S-adenosylmethionine-dependent methyltransferase activity molecular_function
GO:0008168 methyltransferase activity molecular_function
GO:0003676 nucleic acid binding molecular_function
GO:0008276 protein methyltransferase activity molecular_function

KEGG:

id description
ko03012 Translation factors

ZFIN:

id description
ZDB-GENE-040718-206 Predicted to enable S-adenosylmethionine-dependent methyltransferase activity and protein methyltransferase activity. Predicted to act upstream of or within methylation. Predicted to be part of eRF1 methyltransferase complex. Orthologous to human N6AMT1 (N-6 adenine-specific DNA methyltransferase 1).

Ensembl:

ensembl_id ENSDARG00000115421

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00000059 True 1159 mRNA 0.49 8 961607 970951

Neighbor

gene id symbol gene type direction distance location
XLOC_000026 NA coding upstream 50056 794976 ~ 911551 (+)
XLOC_000025 jam2a coding upstream 353360 594584 ~ 608247 (+)
XLOC_000023 mrpl39 coding upstream 370276 532766 ~ 591331 (+)
XLOC_000024 dre-mir-155 coding upstream 385086 576444 ~ 576521 (+)
XLOC_000022 mrpl16 coding upstream 429178 524388 ~ 532429 (+)
XLOC_000028 NA coding downstream 44861 1015812 ~ 1033638 (+)
XLOC_000029 CR450787.2 coding downstream 247740 1218691 ~ 1218805 (+)
XLOC_000030 NA coding downstream 344338 1315289 ~ 1342237 (+)
XLOC_000031 NA coding downstream 387780 1358731 ~ 1360831 (+)
XLOC_000032 NA coding downstream 600896 1571847 ~ 1578251 (+)
XLOC_000018 NA non-coding upstream 603045 355481 ~ 358562 (+)
XLOC_000011 NA non-coding upstream 804325 156792 ~ 157282 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location