G799258 (LOC106588294)


Basic Information

Item Value
gene id G799258
gene name LOC106588294
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 36657848 ~ 36658297 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU909701
TCGTGAGAGTCCTTTCTTCTGGTGTGACGTCCACAACCTCCAACAGGGAAGAGATGGGCTCTGCCTCTGTATTAGGGGTGATGTCCACAACATTCAGGTGGGAAGAAGCCGGGTCTGCCTCTGTATTAGAGGTGATGTCCACCACATTCAGGTGGGAAGAAGCCGGATCTGCCTCTGTATTAGAGGTGATGTCCACCACATTCAGGTGGAAAGAAGCCGGATCTGCCTCTGTGTTAGGGGTGATGTCCTCAACCTCCAGGTGGGAAGAATCTGGGTCTGCCTCTGTGTTCGTGGTGATGTCTTGAACCTCCAGGTGGGAAGATGCCGGGTCTGCCTCTGTGTTAGGGGTGATGTCCTCAACCTCCAGGTGGGAAGAAGCTGGGTCTGCCTCTGTGTTAGGGGTGATGTCTACAACCTCTAGATGGGAAGATGCCGGGTCTGTGTTATGGG

Function

NR:

description
pheromone-regulated protein PRM7-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU909701 True 450 lncRNA 0.54 1 36657848 36658297

Neighbor

gene id symbol gene type direction distance location
trnap-agg-150 NA coding upstream 45505 36612272 ~ 36612343 (+)
trnap-agg-149 NA coding upstream 46908 36610867 ~ 36622475 (+)
trnap-agg-148 NA coding upstream 48310 36609467 ~ 36609538 (+)
trnap-agg-147 NA coding upstream 49712 36608065 ~ 36608136 (+)
trnap-agg-146 NA coding upstream 52516 36605261 ~ 36605332 (+)
LOC110531983 NA coding downstream 276764 36935061 ~ 36937214 (+)
adtrp1 LOC106571895 coding downstream 279551 36937848 ~ 36942240 (+)
LOC110531160 LOC106571896 coding downstream 283212 36941509 ~ 36953375 (+)
LOC110531987 LOC106571899 coding downstream 303018 36961315 ~ 36970867 (+)
LOC118966039 NA coding downstream 372463 37030760 ~ 37063684 (+)
G799250 NA non-coding upstream 11817 36645684 ~ 36646031 (+)
G799249 NA non-coding upstream 12217 36645310 ~ 36645631 (+)
G799245 NA non-coding upstream 17209 36639830 ~ 36640639 (+)
G799239 NA non-coding upstream 26320 36631291 ~ 36631528 (+)
G799262 NA non-coding downstream 11820 36670117 ~ 36670355 (+)
G799263 NA non-coding downstream 13059 36671356 ~ 36671617 (+)
G799251 LOC106571891 non-coding downstream 23861 36682158 ~ 36685079 (+)
G799270 NA non-coding downstream 34688 36692985 ~ 36693304 (+)
G799326 NA non-coding downstream 125901 36784198 ~ 36784407 (+)
G799053 NA other upstream 341043 36313129 ~ 36316805 (+)
G797932 pphln other upstream 1285700 35364988 ~ 35372148 (+)
G797056 NA other upstream 2101226 34555931 ~ 34556622 (+)
G796495 LOC106613263 other upstream 2536108 34121422 ~ 34121740 (+)
G794886 LOC106577459 other upstream 4070460 32583606 ~ 32587388 (+)
G799578 LOC106571900 other downstream 376121 37034418 ~ 37035918 (+)
G799858 LOC106571908 other downstream 908948 37567245 ~ 37570411 (+)
G800834 NA other downstream 1411919 38070216 ~ 38071433 (+)
G801778 NA other downstream 2129764 38788061 ~ 38788354 (+)
G801851 NA other downstream 2274655 38932952 ~ 38933868 (+)

Expression


Co-expression Network