G815611


Basic Information

Item Value
gene id G815611
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 51079556 ~ 51088643 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU927742
atgtgcaaaactgatagagacataccccaagcgacttacagctgtaatcgcagcaaaaggtggcgctacaaagtattaacttaagggggctgaataatttagcacgcccaatttttcagtttttgatttgttaaaaaagtttgaaatatccaataaatgtcgttccacttcatgattgtgtcccacttgttgttgattcttcacaaaaaaatacagttttatatctttatgtttgaagcctgaaatgtggcaaaagatcgcaaagttcaagggggccgaatactttcgcaaggcactgtagtagccatatctaggaaaaccaaagttccaaaggctaggtctaatatagtgtataagaggtcatacaatcatttttgtagtgattcctatgttgttgatgtaaagaatatttgttagtcgtggtgtgtaatgagaagcaaccagccaacttgacacat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU927742 True 458 lncRNA 0.37 2 51079556 51088643

Neighbor

gene id symbol gene type direction distance location
srm srm coding upstream 11652 51061072 ~ 51067904 (+)
exosc10 exosc10 coding upstream 22624 51044415 ~ 51056932 (+)
cntn3a.2 LOC106572060 coding upstream 37911 50965717 ~ 51041645 (+)
si:dkey-178k16.1 LOC106572064 coding upstream 522059 50445552 ~ 50557497 (+)
LOC118966068 NA coding upstream 651462 50423446 ~ 50428094 (+)
cort LOC106572313 coding downstream 17684 51106327 ~ 51107746 (+)
LOC110531197 NA coding downstream 36492 51125135 ~ 51127512 (+)
masp2 masp2 coding downstream 85119 51173762 ~ 51181734 (+)
pex14 pex14 coding downstream 114090 51202733 ~ 51319382 (+)
tardbpl tardbp coding downstream 617223 51705866 ~ 51710352 (+)
G815561 NA non-coding upstream 10058 51007358 ~ 51069498 (+)
G815580 NA non-coding upstream 62775 51015307 ~ 51016781 (+)
G815552 NA non-coding upstream 125132 50953753 ~ 50954424 (+)
G815543 NA non-coding upstream 133801 50945412 ~ 50945755 (+)
G815536 NA non-coding upstream 141339 50938008 ~ 50938217 (+)
G815629 NA non-coding downstream 8719 51097362 ~ 51097596 (+)
G815630 NA non-coding downstream 9136 51097779 ~ 51098009 (+)
G815643 NA non-coding downstream 29457 51118100 ~ 51118396 (+)
G815734 NA non-coding downstream 170266 51258909 ~ 51264781 (+)
G815735 NA non-coding downstream 172730 51261373 ~ 51267078 (+)
G815610 NA other upstream 614 51078447 ~ 51078942 (+)
G815428 NA other upstream 279175 50796214 ~ 50800381 (+)
G813139 NA other upstream 1963938 49115137 ~ 49115618 (+)
G813074 etbr2 other upstream 2072846 48962187 ~ 49006710 (+)
G813071 NA other upstream 2119565 48959749 ~ 48959991 (+)
G815767 casz1 other downstream 256729 51345372 ~ 51346494 (+)
LOC110532349 LOC106591969 other downstream 1234628 52323001 ~ 52325924 (+)
LOC110532368 LOC106572016 other downstream 1637778 52692676 ~ 52734929 (+)
G819897 NA other downstream 3638228 54726871 ~ 54727376 (+)
G820665 NA other downstream 4144615 55233258 ~ 55233798 (+)

Expression


Co-expression Network