Gene
RNA
| Item | Value |
|---|---|
| gene id | G819811 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048573.1 |
| NCBI id | CM023227.2 |
| chromosome length | 79455637 |
| location | 54566816 ~ 54567043 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: plexin-A1-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU932288 | True | 228 | lncRNA | 0.50 | 1 | 54566816 | 54567043 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110532395 | LOC106571990 | coding | upstream | 260643 | 54295022 ~ 54306173 (+) |
| LOC110532396 | LOC106571991 | coding | upstream | 318901 | 54245323 ~ 54249584 (+) |
| LOC110532392 | dffb | coding | upstream | 327310 | 54234796 ~ 54239506 (+) |
| LOC118966073 | NA | coding | upstream | 333369 | 54231749 ~ 54233447 (+) |
| LOC110532391 | LOC106571996 | coding | upstream | 893318 | 53596083 ~ 53676213 (+) |
| twist3 | LOC106572367 | coding | downstream | 359685 | 54926728 ~ 54934570 (+) |
| LOC110532404 | LOC106572363 | coding | downstream | 625310 | 55192353 ~ 55207365 (+) |
| LOC110532406 | LOC106572360 | coding | downstream | 650563 | 55217606 ~ 55224372 (+) |
| LOC110532408 | ctbl1 | coding | downstream | 761069 | 55328112 ~ 55372587 (+) |
| LOC110532409 | LOC106572359 | coding | downstream | 808132 | 55375175 ~ 55410299 (+) |
| G819808 | NA | non-coding | upstream | 7154 | 54559458 ~ 54559662 (+) |
| G819763 | NA | non-coding | upstream | 24815 | 54493903 ~ 54542001 (+) |
| G819787 | NA | non-coding | upstream | 44003 | 54518078 ~ 54522813 (+) |
| G819740 | NA | non-coding | upstream | 108628 | 54454852 ~ 54458188 (+) |
| G819734 | NA | non-coding | upstream | 119816 | 54446764 ~ 54447000 (+) |
| G819812 | NA | non-coding | downstream | 698 | 54567741 ~ 54567967 (+) |
| G819815 | NA | non-coding | downstream | 4800 | 54571843 ~ 54572082 (+) |
| G819816 | NA | non-coding | downstream | 11546 | 54578589 ~ 54578825 (+) |
| G819817 | NA | non-coding | downstream | 11809 | 54578852 ~ 54579064 (+) |
| G819819 | NA | non-coding | downstream | 14566 | 54581609 ~ 54581812 (+) |
| LOC110532368 | LOC106572016 | other | upstream | 1839296 | 52692676 ~ 52734929 (+) |
| LOC110532349 | LOC106591969 | other | upstream | 2241176 | 52323001 ~ 52325924 (+) |
| G815767 | casz1 | other | upstream | 3220322 | 51345372 ~ 51346494 (+) |
| G815610 | NA | other | upstream | 3487874 | 51078447 ~ 51078942 (+) |
| G815428 | NA | other | upstream | 3766435 | 50796214 ~ 50800381 (+) |
| G819897 | NA | other | downstream | 159828 | 54726871 ~ 54727376 (+) |
| G820665 | NA | other | downstream | 666215 | 55233258 ~ 55233798 (+) |
| dlgap4a | dlgap4 | other | downstream | 963994 | 55531033 ~ 55647541 (+) |
| G820944 | NA | other | downstream | 1130597 | 55697640 ~ 55697978 (+) |
| G821363 | uhrf1bp1 | other | downstream | 1406999 | 55974042 ~ 55975316 (+) |
