G833949


Basic Information

Item Value
gene id G833949
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048573.1
NCBI id CM023227.2
chromosome length 79455637
location 67741829 ~ 67742262 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU948427
gtaagaaactgactgttagagctgttgaggctccatggattgatgaggaactgAAAAACTGTGCggctgaaagagatggggcaaaaggagtggctaataagtctgacTGCACATCTGATGGTTTTgattactgcaaattgagaaattatgttaCTAAACTCAACAACGAAAAATTATAAACTGTATAATGAaaccaagatcaatgatataaagaatgatggggaAAAACCTTGAGGTACTttcaatgaaattatgggcagaatttcatcgaatcagatggcttattcatcacaaaaataatgttgccaattattttaatgattacttcattggcaaagtgggcaaacttaggcaggaaatgccaacaacaaacaGTGAGCCATTGTACATcgtacataaaaaataaataaaaaaagaatacTGAAGGAAAAGCa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU948427 True 434 lncRNA 0.35 1 67741829 67742262

Neighbor

gene id symbol gene type direction distance location
tebp tebp coding upstream 115852 67622423 ~ 67625977 (+)
LOC110532729 LOC106572697 coding upstream 123715 67607673 ~ 67618114 (+)
LOC110532726 LOC106572718 coding upstream 223832 67480352 ~ 67580588 (+)
LOC110532722 LOC106572704 coding upstream 463526 67263564 ~ 67278303 (+)
LOC110532719 ssrd coding upstream 691944 67045197 ~ 67049885 (+)
LOC110533034 LOC106572723 coding downstream 26078 67768340 ~ 67772836 (+)
LOC110533035 LOC106572734 coding downstream 162769 67905031 ~ 67911226 (+)
LOC118965940 LOC106572726 coding downstream 180395 67922657 ~ 67934517 (+)
LOC110532736 LOC106572735 coding downstream 357431 68099693 ~ 68111105 (+)
LOC110533037 NA coding downstream 467917 68210179 ~ 68212326 (+)
G833947 NA non-coding upstream 2054 67739554 ~ 67739775 (+)
G833945 NA non-coding upstream 3620 67737990 ~ 67738209 (+)
G833944 NA non-coding upstream 9781 67731849 ~ 67732048 (+)
G833942 NA non-coding upstream 11447 67730104 ~ 67730382 (+)
G833918 NA non-coding upstream 74028 67667056 ~ 67667801 (+)
G833959 NA non-coding downstream 22456 67764718 ~ 67764939 (+)
G833972 LOC106572784 non-coding downstream 64436 67806698 ~ 67808863 (+)
G834092 NA non-coding downstream 297487 68039749 ~ 68040023 (+)
G834095 NA non-coding downstream 300873 68043135 ~ 68043342 (+)
G834097 NA non-coding downstream 305480 68047742 ~ 68047960 (+)
G833906 LOC100194703 other upstream 120463 67620878 ~ 67621366 (+)
G833541 NA other upstream 527945 67213420 ~ 67213884 (+)
G833241 LOC106572720 other upstream 807342 66931688 ~ 66934487 (+)
G833139 LOC100380641 other upstream 920190 66814464 ~ 66821639 (+)
G833100 LOC106613929 other upstream 982156 66759278 ~ 66759673 (+)
G834099 NA other downstream 306651 68048913 ~ 68049222 (+)
fance fance other downstream 474816 68213202 ~ 68218960 (+)
G834228 NA other downstream 525775 68268037 ~ 68268408 (+)
G834235 NA other downstream 544953 68287215 ~ 68288525 (+)
LOC110531253 LOC106572751 other downstream 724297 68451084 ~ 68470509 (+)

Expression


Co-expression Network