XLOC_027341


Basic Information

Item Value
gene id XLOC_027341
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007115.7
NCBI id CM002888.2
chromosome length 78093715
location 23844584 ~ 23851648 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00057151
taactatactgtgcattacagtggccatattcatgtaTGTAAAAACacgaaaacagcattttaTCATCACCTTTCaccaaagttgtcctaaaacttgtcacaattagggaaaaaaaagacattaagtGTTGTCTGCTGTTTATCAGGAACACTGAGAGTCTAGTATTAGTCAGAGACTTATCTTCAGTTGGCAGCTGGTGAAGCCGTCCTGTGTCACAGTACATTATCGCTTACATCAATCATATATCATGATCAAATCTTGTATGGATTAACAAACATCACACGCTGAGGGGGGAAAAATGAAACcgcatttctgtattttttttatcccTCTTCATTTCATTTCAGGTTCTTATTTCAGTGCATTCTGGATGAGTCATTTTTCTCATTAGTGCTGCCACTCACAAGGGTACGAGCAGGGGGTAATGAGGGTAATTAACTCAAaagacacactcaaacacacacacacacacacactccctcttgcacacaaacacacaaaggcGCAAACACATTTTCTCCCTCAGTATCAAAACAACTCAAGAGCAAGGTCAAACAATAGCCAGTACAGCTAATACGCTACACATAAACAATGGCTGAAATTAGATCAGAAGAAACAGGGAAGCTAATAAACAGGTAGTATTTGAGTTGTATTGTCT

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00057151 True 659 lncRNA 0.39 3 23844584 23851648

Neighbor

gene id symbol gene type direction distance location
XLOC_027340 NA coding upstream 108613 23549874 ~ 23735971 (+)
XLOC_027339 NA coding upstream 338990 23432029 ~ 23505594 (+)
XLOC_027336 trhde.2 coding upstream 436555 23223881 ~ 23408029 (+)
XLOC_027338 AL935196.1 coding upstream 465206 23379262 ~ 23379378 (+)
XLOC_027337 NA coding upstream 543356 23300889 ~ 23301228 (+)
XLOC_027342 NA coding downstream 28746 23880394 ~ 23888794 (+)
XLOC_027343 NA coding downstream 906700 24758348 ~ 24758781 (+)
XLOC_027344 NA coding downstream 1162401 25014049 ~ 25016268 (+)
XLOC_027345 NA coding downstream 1232447 25084095 ~ 25089847 (+)
XLOC_027346 kin coding downstream 1329924 25181572 ~ 25188160 (+)
XLOC_027331 BX537168.1 non-coding upstream 1281019 22547576 ~ 22563565 (+)
XLOC_027357 NA non-coding downstream 1902389 25754037 ~ 25755349 (+)

Expression


Co-expression Network