XLOC_002741 (ponzr2)


Basic Information

Item Value
gene id XLOC_002741
gene name ponzr2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 22123831 ~ 22127942 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00005089
GTTCCTGTATAAAGGCAAGATACTAATCGCAGATTTAGAAACAGTAGATACTTTCCATGACGTTGGATCTGCCATCAAAAAGCTGTAAGCATGTCGAATGTAATGGTAATAACACAGCCCCAGCCTACAATGATCTCTGCCCATTCTGATCATTGGGGTTCAGATATTTGTGACTGCTGCGATGACGTGCCTGAATGTTGCTTTGCTTTCTGGTGTTTCTCGTGTTACACATGCATTCAAGCCAGAAACTATGGTGAGTGTTTATGTCTCCCTCTGCTGGATATCTTCTGTGGCGGAATGATTCCACCCATCACCATGTCGATTAGGACCTCGATGCGACAGCGGTATGGCATACAGGGCACCATGTGTAATGACTGTGTGTTGTCCACATTCTGCAGACCCTGTGTTTGGTGTCAAATGTCCAGAGAAATGAAAGAACGGGATTTACAAATTGCTCTTATTCGCACTAGAAATTTATGAAGTCTTATTACACTACTGCAAAGATGCCTGCGGGCGGTGGTCCTTAAAATGAAGAAAATCATAAACAATATGTCAGAATCAGGGGTTATAAATACTTACTATCGACTggtcattttattatgcatttatatcATACGATGCCATTGTTTTTACATCTCTTTTGATGTATTTTGTGATTAAACACAATGCTATTTAAATTAGCTATTTCTAATGGAAAGAAAAAGATGGATATATTGTCACATATTGTAATGTTTACCAAGATATCCATCTTATCATTATAGTTTCTAATCAGCATcactaataaaataacattattacacTGTAAGAAATTCTATCATCAATTAGTCCtatatgttttaggtcattgtaacttactaaactaagttaatcttgttctaacttaattttataagttatgcaagctgattgtcagtttaacataatataagtacaatggactcataaggttagtTTGAttcagcttcttttttttttttttttgcattgaatgtATCTTTATGGAAATGTTGTTGGAATGTTGTATATAATTTATGGCACAATAAATGTTTATATGAAAAGA

Function

GO:

id name namespace
GO:0008150 biological_process biological_process
GO:0005575 cellular_component cellular_component
GO:0003674 molecular_function molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-050411-41 No description available

Ensembl:

ensembl_id ENSDARG00000088539

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00005089 True 1060 mRNA 0.35 4 22123831 22127942

Neighbor

gene id symbol gene type direction distance location
XLOC_002740 si:ch73-111e15.1 coding downstream 6710 22110842 ~ 22117121 (-)
XLOC_002739 BX005027.3 coding downstream 17500 22097328 ~ 22106331 (-)
XLOC_002738 ponzr10 coding downstream 28326 22088465 ~ 22095505 (-)
XLOC_002737 ugt5g2 coding downstream 37205 22082596 ~ 22086626 (-)
XLOC_002736 tlx3b coding downstream 66830 22051054 ~ 22057001 (-)
XLOC_002742 cldn7b coding upstream 16826 22144768 ~ 22150419 (-)
XLOC_002743 fgf11b coding upstream 33643 22161585 ~ 22249444 (-)
XLOC_002744 BX005194.1 coding upstream 143847 22271789 ~ 22271903 (-)
XLOC_002745 NA coding upstream 353216 22481158 ~ 22491458 (-)
XLOC_002746 CT573337.1 coding upstream 366884 22494826 ~ 22497980 (-)
XLOC_002732 NA non-coding downstream 279968 21646154 ~ 21843863 (-)
XLOC_002731 NA non-coding downstream 474103 21627807 ~ 21649728 (-)
XLOC_002730 BX957322.2 non-coding downstream 550374 21570196 ~ 21573457 (-)
XLOC_002725 BX004800.2 non-coding downstream 1215275 20908442 ~ 20908556 (-)
XLOC_002724 NA non-coding downstream 1235071 20842918 ~ 20888760 (-)
XLOC_002748 NA non-coding upstream 402843 22530785 ~ 22534924 (-)
XLOC_002749 NA non-coding upstream 426407 22554349 ~ 22567208 (-)
XLOC_002750 NA non-coding upstream 476331 22604273 ~ 22607715 (-)

Expression


Co-expression Network