XLOC_002746 (CT573337.1)


Basic Information

Item Value
gene id XLOC_002746
gene name CT573337.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 22494826 ~ 22497980 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00005095
ATGTTATTCAAAGGAACCAGCTTCGACTTTCACCCACTCACTCATTCTATCAAAGAAACTCTCGAGCCAGACTTTCGAGAAGCTCCATTGCCTAAAATGCAGCTCTCCAACCTCCTCCTGGCCCTTGCCGTCACAATGTGGTTCTCCGAACACTGGGGAACTGCAATCGTGGTTGAAGATTTCAACCATATTGAGAGATGCAAGGACTCGCTGTATATGGGCACCCCACCACGCGGCTTTAAAGACCCCAGCCTCAAGAAGATCTGCCAACGCTACGCTGACAAACCCAGATTTGTGACCCTGTATGATCCCAAAATCCGCATTCCAGTTTACTCTGCATACAGCTTCAAGAAAACAGAGGGTGATCGGCGTGTGGACTATCCCTGGATGTACGAACCTCAGCTTGCAGAGATTGATGGGAATGGGAACATGATGCCATTCCCTACTGGATACTTACACATGAAGTTTGAGGACAGCCAGGCGGTTTTGGATGACTATTCAGACGTGGTTCTGTACGAGAGAGGGCACCTAAATCCAGACCAGCACCAGTCTGACCCTCAAGACCGAGCGGCCACATACACGCTCACCAACGTCGTGCCAGAAATCCGCGAGTTCAATATCGGGCCCTGGCGCCAGTATGAAGAGCGTATCCGCGTGCGCCTCAACAACTTCTGCAGGGGCACAGCTTACATCGTGACTGGCGTTATCCACGCTGGAAACATGATCCGACGTAACAACCTAAATCGTGTGGGCATCCCCGAAGACGTGTGGTCTGCTTACTGCTGCACCGACTACGACCGAAACTCCCCGCACGTCGAGCGCATCCACTTCCCGACCTACGCGGCCATTGCCAAGAACGCAAAAGAGGGAAACACGGTTCAAGAGTTAACGGTGTTGGAGCTCGAGCTCATTCTGACACAGAGAATGAATGTAGACATGAACTTCCAGCTCTTCTATGATAACTGTAACTCACCTTCACCTCTTCCTCCTTACCTTCTTCACAGCGTATGA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000117144

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00005095 True 1011 mRNA 0.51 2 22494826 22497980

Neighbor

gene id symbol gene type direction distance location
XLOC_002745 NA coding downstream 3368 22481158 ~ 22491458 (-)
XLOC_002744 BX005194.1 coding downstream 222923 22271789 ~ 22271903 (-)
XLOC_002743 fgf11b coding downstream 245382 22161585 ~ 22249444 (-)
XLOC_002742 cldn7b coding downstream 344407 22144768 ~ 22150419 (-)
XLOC_002741 ponzr2 coding downstream 366884 22123831 ~ 22127942 (-)
XLOC_002747 zgc:172339 coding upstream 3783 22501763 ~ 22506044 (-)
XLOC_002748 NA coding upstream 32805 22530785 ~ 22534924 (-)
XLOC_002749 NA coding upstream 56369 22554349 ~ 22567208 (-)
XLOC_002750 NA coding upstream 106293 22604273 ~ 22607715 (-)
XLOC_002751 AL807389.3 coding upstream 254252 22752232 ~ 22752348 (-)
XLOC_002732 NA non-coding downstream 650963 21646154 ~ 21843863 (-)
XLOC_002731 NA non-coding downstream 845098 21627807 ~ 21649728 (-)
XLOC_002730 BX957322.2 non-coding downstream 921369 21570196 ~ 21573457 (-)
XLOC_002761 NA non-coding upstream 1015142 23513122 ~ 23519215 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000304_09949821_09951564 NA coding CI01000304 null 9949165 ~ 9953257 (-)