XLOC_027428 (dre-mir-430b-10)


Basic Information

Item Value
gene id XLOC_027428
gene name dre-mir-430b-10
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007115.7
NCBI id CM002888.2
chromosome length 78093715
location 28709454 ~ 28709534 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00053925
CAGTTGACATCAACTCTAACTTTAGCATCTTTCTTTTAAGCAAAGTAGAAAGTGCTATCAAGTTGGGGTAGATGTTTGCTG

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000114956

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00053925 True 81 miRNA 0.37 1 28709454 28709534

Neighbor

gene id symbol gene type direction distance location
XLOC_027427 dre-mir-430c-1 coding upstream 185 28709197 ~ 28709269 (+)
XLOC_027426 dre-mir-430a-4 coding upstream 317 28709056 ~ 28709137 (+)
XLOC_027425 dre-mir-430b-6 coding upstream 524 28708850 ~ 28708930 (+)
XLOC_027424 dre-mir-430c-1 coding upstream 789 28708593 ~ 28708665 (+)
XLOC_027423 dre-mir-430a-2 coding upstream 943 28708430 ~ 28708511 (+)
XLOC_027429 znf1059 coding downstream 105316 28814850 ~ 28822393 (+)
XLOC_027430 NA coding downstream 253240 28962774 ~ 28976560 (+)
XLOC_027431 si:dkey-13e3.1 coding downstream 288061 28997595 ~ 29000569 (+)
XLOC_027432 NA coding downstream 377479 29087013 ~ 29088974 (+)
XLOC_027433 NA coding downstream 444818 29154352 ~ 29155020 (+)
XLOC_027435 NA non-coding downstream 462906 29172440 ~ 29281146 (+)
XLOC_027436 NA non-coding downstream 496331 29205865 ~ 29208680 (+)

Expression


Co-expression Network