drd3 (LOC106579486)


Basic Information

Item Value
gene id drd3
gene name LOC106579486
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 15988295 ~ 16040205 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021620317.2
CTCATGTCACCGGGACGTCACCATGGCGATGTTTAGCGGATCTGAACGCTTCTTCTGGAATGACTCGGAACAGGTTCCGGAAGACCTCCGCCTCCAGTGGAATTCCTCTGGTGGTTGGGAGGAGGATACGGAGCGTAACTACTACGCCATGCTGTACTCCCTGCTCATCCTGGCCATCGTGTTTGGCAACGTGCTGGTGTGTCTGGCTGTGGTGCGGGAGAGGTCCCTACAGACCACCACCAACTACCTAGTGGTGAGCCTGGCTGTAGCTGACCTGCTGGTGGCCTCGCTTGTCATGCCCTGGGCCGTATACCTGGAGGTGGTCGGAGGGGCGTGGCTCTTCAGCAGGATGTACTGTAACATCTTTGTCACCTTGGATGTCATGATGTGTACCGCCAGCATTCTCAACCTGTGTGCTATCAGCATTGACAGGTACACAGCGGTGGTGATGCCTGTCCTCTACAACACCACACACAGCTCCAGGAAGCGGGTCTCGGTCATGATCGCGACAGTGTGGATCCTGGCCTTTGCTGTATCCTGCCCCCTGCTGTTCGGATTTAACACATCAGGCGACCCGACGGTGTGCTCCATCTCCAACCCTGACTTTGTGATCTACTCGTCGGTGGTGTCCTTCTACCTGCCCTTCACTGTCACCCTGCTGGTGTACGTCCGCATCTATGTCTTCCTacggaaaaggaggaagaggatcgCCTTCCGCCAGGCCAGAAGTGGAAAGGTCCAGCCAGGCTCGGCCCTGCCCTCAGTGGAGACGTGTCTGCAGGAGGAAACCCCCAAGGAGAAGAGAGACCTGTCTCCCATCAGGATCAAAGTGGAGAGTGTGGAGCCGGCAGTGCCCCCTAAAACTCACCTCCTGTCGGGGTGCCTGAGGCGTAAGCGTACCCGGACGGCCCCTGTGGAGAACACTCTGCTGCCCCCAGTGGACATCCAGAACTACTGCAGCATCAGCCACGCCTCCTGTGGCCGCACCGAGCACGAACAGGACCGTGCCGAAGAAGAGGAGGAGTTGGCCAAAGAGAGAGCGCGTAGACCCGTGAGAAGGAGCTGTGAGGTCAAGGAGTTGTCCAATGGACGCATTCACACGGCCCTCCGCCCCACCCCCTGCTCCCAGTCCCTGGCcggccaacaacaacaacaacatggaatcAGGAGCATGCAGAACAGGGAGAAGAAGGCTACGCAGATGCTGGCCATTGTTCTTGgAGTGTTCCTGATCTGCTGGCTGCCGTTCTTCGTGACTCACATCCTGAACACCCACTGCAGGACATGTCGTATTCCCCCGGAGCTCTACAGCGCCTTCACCTGGCTGGGCTATGTCAACAGCGCCCTCAACCCTGTCATCTACACCACCTTCAACATTGAGTTCAGACGCGCCTTCATCAAGATCCTCAGCTGCTGAGAACAGAGTTGGTCCGGCATGACCATGTCAGGCTAATGGCCAGGCACCTGAACTGTACTGGACCTTGGGCCCGGCATACCTGAGTATGAATAAGACGCATGAGTCATGGCCTGAGCCTGACTGCATATTATCAGGGGCAATGACTCTACTTCAATAAGATCATCTGCTGCTGAGAGGCCAATAGGTCCATCATAACCATGTCAGGCAAGGCTTATGACCTGTACTGGACCTTAGGCCCGGCACACCTGATGTGCACACCTGAGCATGGATAATGGATACAGTACCTGAGCCATGGATACATGAGCCATGACCCGTTCATCTTTAGGGTCAATGACTCGTCTTCATTGAAATCATCTCCAGCTGAGAGGACAGATCCATAAAGACCATGTCTGACCATGCTCTTCCACTGAACCTCTCAGCACACTATAGCACACCTGAGCAAGGACTCTCTGACGGTAACACAGGCCCTGCACACCTGAGCTGAACTACAGGTACCGTATCAGACTTGGCTGCTAGTTAGCTGGGCAAGGACCTGCTCTACCTGTGTTATACTGTACACAGCGGGCAGAGGACATGAAGGGAGGATATGGGAGTTAAATTCAAACCATACAAATTACTGCTACAATACTGGTGATTCAGAGGTGGGGGAAATACTTGTATAGAGAAAAGAGGACAAATGCAACAAAGGAAATGAAGAGAAGTAGAGTTCCACACATCCATATGACACAATGTACAGCCATCAAAAGACACTGAATGCCCTTTCCCTGCTGCCTAATGCAGGGGAATTCAACCGGAGGTACTGCAGGGGCTCCGTgacaataaatacaaaataaagtgGAAGAAAAAATAAAGTGGAAGAAATACAATTTTGATTTAAATGTTGTTGTGACTATCCCTAGCAACAACAGATGAAACATTTTTTATGACatacttcttccacattttgttgtgttacagcttgaatttaaaattgattcaatttagattttttttgttgtcaatgacctacacacaatacaataataat
>TU1082423
CTGCATATTATCAGGGGCAATGACTCTACTTCAATAAGATCATCTGCTGCTGAGAGGCCAATAGGTCCATCATAACCATGTCAGGCAAGGCTTATGACCTGTACTGGACCTTAGGCCCGGCACACCTGATGTGCACACCTGAGCATGGATAATGGATACAGTACCTGAGCCATGGATACATGAGCCATGACCCGTTCATCTTTAGGGTCAATGACTCGTCTTCATTGAAATCATCTCCAGCTGAGAGGACAGATCCATAAAGACCATGTCTGACCATGCTCTTCCACTGAACCTCTCAGCACACTATAGCACACCTGAGCAAGGACTCTCTGACGGTAACACAGGCCCTGCACACCTGAGCTGAACTACAGGTACCGTATCAGACTTGGCTGCTAGTTAGCTGGGCAAGGACCTGCTCTACCTGTGTTATACTGTACACAGCGGGCAGAGGACATGAAGGGAGGATATGGGAGTTAAATTCAAACCATACAAATTACTGCTACAATACTGGTGATTCAGAGGTGGGGGAAATACTTGTATAGAGAAAAGAGGACAAATGCAACAAAGGAAATGAAGAGAAGTAGAGTTCCACACATCCATATGACACAATGTACAGCCATCAAAAGACACTGAATGCCCTTTCCCTGCTGCCTAATGCAGGGGAATTCAACCGGAGGTACTGCAGGGGCTCCGTgacaataaatacaaaataaagtgGAAGAAAAAATAAAGTGGAAGAAATACAATTTTGATTTAAATGTTGTTGTGACTATCCCTAGCAACAACAGATGAAACATTTTTTATGACatacttcttccacattttgttgtgttacagcttgaatttaaaattgattcaatttagattttttttgttgtcaatgacctacacacaatacaataataatggcaaagtggaattatgtttttagaaatttgtacacattaataaaaaatgaaaatctgaaatgtcttgactcAGTAggtgttcaacccctttgttatggcaagccaaaataagttcaggagtacgaATTTGCCTAACaaggatttttgaatgactacctcatctttgtaccccagccgagcagtgaatttcgaacacagattcaaccacaaagaccagggaggttttccaatacctcacaaagaaggaaacctattggtagataggtaaaaaaaaaggaaaaaaaag
>TU1082425
GCCCCACCCCCTGCTCCCAGTCCCTGGCcggccaacaacaacaacaacatggaatcAGGAGCATGCAGAACAGGGAGAAGAAGGCTACGCAGATGCTGGCCATTGTTCTTGgAGTGTTCCTGATCTGCTGGCTGCCGTTCTTCGTGACTCACATCCTGAACACCCACTGCAGGACATGTCGTATTCCCCCGGAGCTCTACAGCGCCTTCACCTGGCTGGGCTATGTCAACAGCGCCCTCAACCCTGTCATCTACACCACCTTCAACATTGAGTTCAGACGCGC
>TU1082452
GGGCGCCCCACAGCTCTGGGTGCAGTTAGAGCGGATAAAAACAGTCCGGACAACTTTTACCTTCCAACGGACGGATTCCACGATGGCACCTCATGCATCCTGCGCTGAAACAGCCTAACAGGTCTCTCACCCAGCCCTTCTCTCATGTCACCGGGACGTCACCATGGCGATGTTTAGCGGATCTGAACGCTTCTTCTGGAATGACTCGGAACAGGTTCCGGAAGACCTCCGCCTCCAGTGGAATTCCTCTGGTGGTTGGGAGGAGGATACGGAGCGTAACTACTACGCCATGCTGTACTCCCTGCTCATCCTGGCC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021620317.2 False 2444 mRNA 0.52 7 15988582 16030452
TU1082423 False 1194 lncRNA 0.41 1 15988295 15989488
TU1082425 False 283 TUCP 0.57 2 15989634 15994884
TU1082452 True 316 lncRNA 0.56 2 16030278 16040205

Neighbor

gene id symbol gene type direction distance location
LOC110536560 LOC106579448 coding downstream 90355 15873634 ~ 15899014 (-)
LOC118937322 LOC106579448 coding downstream 91908 15889428 ~ 15896674 (-)
naa50 LOC106579447 coding downstream 171659 15812225 ~ 15816923 (-)
LOC110535357 LOC106579444 coding downstream 178088 15800721 ~ 15810494 (-)
LOC110535356 LOC106579518 coding downstream 287131 15696797 ~ 15701451 (-)
and1 LOC106579456 coding upstream 265857 16296309 ~ 16302789 (-)
cops9 NA coding upstream 272480 16302932 ~ 16308724 (-)
otos LOC106579496 coding upstream 282476 16312928 ~ 16314905 (-)
lrrc31 lrrc31 coding upstream 330748 16361200 ~ 16368132 (-)
LOC110535375 LOC106590489 coding upstream 340398 16370850 ~ 16381722 (-)
G949284 NA non-coding downstream 2750 15985123 ~ 15985832 (-)
G948481 LOC106607612 non-coding downstream 8250 15980069 ~ 15980332 (-)
G948473 NA non-coding downstream 19822 15968504 ~ 15968760 (-)
G948447 NA non-coding downstream 37191 15951141 ~ 15951391 (-)
G948434 NA non-coding downstream 49564 15938791 ~ 15939018 (-)
G949330 NA non-coding upstream 19920 16050372 ~ 16050575 (-)
G949333 NA non-coding upstream 24155 16054607 ~ 16055393 (-)
G949335 NA non-coding upstream 27396 16057848 ~ 16059566 (-)
G949343 NA non-coding upstream 39872 16070324 ~ 16070550 (-)
G949345 NA non-coding upstream 41101 16071553 ~ 16071765 (-)
pdx1 pdx1 other downstream 503342 15480498 ~ 15485495 (-)
pan3 pan3 other downstream 532838 15439415 ~ 15455911 (-)
G947894 LOC106579543 other downstream 622281 15365950 ~ 15366301 (-)
G949329 NA other upstream 19531 16049983 ~ 16050305 (-)
G949426 NA other upstream 263062 16293514 ~ 16294051 (-)
G949560 NA other upstream 553023 16563634 ~ 16636989 (-)
G949292 NA non-coding upstream 4707 15999591 ~ 15999810 (-)
G949293 NA non-coding upstream 5169 16000053 ~ 16000338 (-)
G949295 NA non-coding upstream 8492 16003376 ~ 16003625 (-)
G949297 NA non-coding upstream 9684 16004568 ~ 16004970 (-)
G949302 NA non-coding upstream 20660 16015544 ~ 16015838 (-)

Expression


Co-expression Network