Gene
RNA
| Item | Value |
|---|---|
| gene id | G949302 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 16015544 ~ 16015838 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1082442 | True | 295 | lncRNA | 0.32 | 1 | 16015544 | 16015838 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110536560 | LOC106579448 | coding | downstream | 117317 | 15873634 ~ 15899014 (-) |
| LOC118937322 | LOC106579448 | coding | downstream | 118870 | 15889428 ~ 15896674 (-) |
| naa50 | LOC106579447 | coding | downstream | 198621 | 15812225 ~ 15816923 (-) |
| LOC110535357 | LOC106579444 | coding | downstream | 205050 | 15800721 ~ 15810494 (-) |
| LOC110535356 | LOC106579518 | coding | downstream | 314093 | 15696797 ~ 15701451 (-) |
| and1 | LOC106579456 | coding | upstream | 280471 | 16296309 ~ 16302789 (-) |
| cops9 | NA | coding | upstream | 287094 | 16302932 ~ 16308724 (-) |
| otos | LOC106579496 | coding | upstream | 297090 | 16312928 ~ 16314905 (-) |
| lrrc31 | lrrc31 | coding | upstream | 345362 | 16361200 ~ 16368132 (-) |
| LOC110535375 | LOC106590489 | coding | upstream | 355012 | 16370850 ~ 16381722 (-) |
| G949297 | NA | non-coding | downstream | 10574 | 16004568 ~ 16004970 (-) |
| G949295 | NA | non-coding | downstream | 11919 | 16003376 ~ 16003625 (-) |
| G949293 | NA | non-coding | downstream | 15206 | 16000053 ~ 16000338 (-) |
| G949292 | NA | non-coding | downstream | 15734 | 15999591 ~ 15999810 (-) |
| G949284 | NA | non-coding | downstream | 29712 | 15985123 ~ 15985832 (-) |
| G949306 | NA | non-coding | upstream | 4669 | 16020507 ~ 16020810 (-) |
| G949330 | NA | non-coding | upstream | 34534 | 16050372 ~ 16050575 (-) |
| G949333 | NA | non-coding | upstream | 38769 | 16054607 ~ 16055393 (-) |
| G949335 | NA | non-coding | upstream | 42010 | 16057848 ~ 16059566 (-) |
| G949343 | NA | non-coding | upstream | 54486 | 16070324 ~ 16070550 (-) |
| drd3 | LOC106579486 | other | downstream | 20660 | 15988295 ~ 16040205 (-) |
| pdx1 | pdx1 | other | downstream | 530304 | 15480498 ~ 15485495 (-) |
| pan3 | pan3 | other | downstream | 559800 | 15439415 ~ 15455911 (-) |
| G949329 | NA | other | upstream | 34145 | 16049983 ~ 16050305 (-) |
| G949426 | NA | other | upstream | 277676 | 16293514 ~ 16294051 (-) |
| G949560 | NA | other | upstream | 567637 | 16563634 ~ 16636989 (-) |
