XLOC_028407 (ano6)


Basic Information

Item Value
gene id XLOC_028407
gene name ano6
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007115.7
NCBI id CM002888.2
chromosome length 78093715
location 1878573 ~ 1914228 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00055155
GTGGATTTCAATGGGAACCAGGACTTTCTGTTTTTCAATGATGGAAAGCGAAGGATCGACTTTGTTTTGGTGTATGAATATGAAGAGTCTAAAAATGGATCCAACAAAAAAGCCTCAGTTATAAGAAGAAAAAAAAGGCGAAGAGAGTTTTTCGAAGGAAGCCTGATGAATAAGGGATTGCATCTGGAAATGACACAATCCGTAGTGGATGAGAAGCTTTTCTTTGTGAAATTGCACATGCCGTTCGATGTTCTGTGTGCAAATGCTGAAGTCCTGCATATTAAACTGCCCATCAAATGCAATGACCTCCGTACACAATCCTCCAAGCACAACTGCTGCACTAAACCATTCTACCCTAATGAGGACGTGATTGGCAAAGAGCCGGACTACTTCACGGCGCCCTTCAGGAAAGATCTGCTCAACCGTTTTCAGCTAAAGGAAAGAGAGGGCAGGGAGTTATTTACACCGACCATGAGGAGCAGAATGGTGTATTATATCCTCAGCCGAGCAGAGTATGATATAAAAGGAGAAAATAAGAAGTTTGGGATCACAAAGCTGCTTGCTGGAGGCATCTATAAGGCTGCGTATCCATTACATGACTGCAGGTTTAATGTGAAGTCTAAAGAGGAGGACTGTCCCAATGAGCGTTATCTGCTGTACAGTGAGTGGGCGCATCCTAAAAACTTCTACAAGATGCAGCCGCTGGACCTGATCAGGAAGTATTTCGGTGAGAAAATCGGCATTTATTTCGCCTGGTTGGGTTTCTACACGTTCATGTTGAGCCTCGCTGCTGCGTTCGGACTCGGCTGTTTCATATACGGGTACAGAAGCAGAGAGAGCAGCACATGGAGCAAAGAGGTGTGTGACCCTGATATTGGTGGACAGATTGTCATGTGCCCGCAGTGTGATAATAACTGTCCGTATTGGCGACTCAACACCACGTGCGAGTCCTCGAAAAGGCTGTGTGTGTTTGATAACTTTGGGACTTTAGTGTTTGCTGTCTTCATGTCTGTTTGGGTGACTCTGTTCTTGGAGTTCTGGAAACGTTACCAGGCCAAACTGGAGTACAAGTGGGACACAGTGGAGTTTCAGCAGCAGGAGGAGCAGCCCAGGCCTGAATATGAGGCTAGATGCACCTATGAACGATTTAGTCCTATCACACAGTCCAATGAGAAGGTGCCGTATACAGCCTGTGGAAAGTGCATGAGAGTGTCGTGTGGCATTGGCACTGTGCTTTTCTGGATTCTGTTGATCGTAGCGTCAGTGGTCGGGGTGATTGTGTATCGTTTGGCGATGTTTATGGTGTTCTCGATGCAGCTGCGCTCTGACCTCAATAGAAAAGAGCTGGAGCCGTTCAGAGAGTACATCACGCCTCAGATGGCCACATCCATCACCGCCTCCATCATCaacgtcatcatcatcatgatcctCAATATTGTCTACGAGAAAGTGGCCGTCTGGATCACAGACTTCGAGCTGCCACGGACAAAAACAGAGTATGAGAACAGCCTGACGCTCAAGATGTTCCTCTTTCAGTTCGTCAATTTTTACTCGTCTTGTTTCTACATCGCCTTCTTCAAAGGGAAGATTGTTGGTTATCCAGGAGAACCCGTCTACTGGTTAGGAAAGTTTCGCAATGAGGAGTGTGATCCTGGTGGCTGTCTGACTGAACTGACCACTCAGCTGTCAATCATTATGACTGGAAAGGCCGTCTGGAACAACATACAGGAAGTCCTGCTGCCGTGGCTGAAGAATCTGATGTTTCGTCATTGCACCCAGGTGGGATCAGAAAAAGCGATTCCTCGCTGGGAACAAGACTATCAGCTCCAGCCGATGGGAACACTCGGCCTGTTTTATGAATATCTGGAGATGGTGATCCAGTTTGGCTTTGTGACTCTGTTTGTGGCGTCTTTCCCGCTGGCTCCTCTTCTGGCGCTGGTCAATAACCTGTTTGAGATCCGTGTGGACGCCTGGAAGTTCACCACTCAGTTTCGTAGGATTGTCCCAGAGAAAGCTCAGGACATCGGAGCCTGGCAGCCCATCCTGCAGGGGGTGACCATTCTGGCGGTGGTCACTAATacTGCTATCATCGCCTTCACTTCTGACATGATCCCTCGTCTGGTTTATTATTGGGCTTTTTCTGTCAGTCCTTACGTAGAGAACTCAAACCACACTATGGCCGGCTTCATCGACAGCTCTCTGTCTGTTTTCAACATTAGTCACTTTGACGATAAAACCAGACCTCGAGACGACATCAAACCGATCTGGTTTAACAACATCACCACGTGCCGGTATCGAGATTACAGGAATCCCCCTGATCATCAGAACCCATATCAGTTCAATGTTTATTACTGGCATGTCATCGCCGCCAAACTGGCTTTCATGATCGTGGTGGAGCACATTGTGTATTTCACCAAGTTCATGCTGTCCTACTTGATCCCGGATGTTCCCGAAGCTCTGAACGAGCAGATCAAACGTGAGCGATTCCTGACGCGGGACATCCTAAACAACAGCCAGTTGACAGACCTGATAAAACCCATCCGAGAGAAACTGCAGACGGACGTGGCAGACTTCACTGAGCTGGAGGAGCTGTTATAACGACACAGTGATGTAACGCACAACTCAATCCCAACACTGCATACACCGTGGGAAATGTCTCTCAATGCACAGCTGCCTTATTcagtgattcacaagtgttttctgtttgtttatttaagttgtgaattgcattatgggatgttgatctctgctctgtccacttttgatgtcgaaaattcaactctgcagtttaacaaagtgacttttagtgacattttattagtttaaaataatatatagagataaataaggctgtaaaataagATAAAGTGGTGCAAGGTGTTACATAGCGTAATACACAAcacaaacccagacaatatatcactgcaaactattaaaaatgcagtttttacaggTTTTAAGGTTAACATTTTTTGGAAGAatgatcaagatcccataatgcaagtcaaataacaaaatatgaccgtgacggtgactcagtggttagcactgtggcctcccagcaagaaggtcacagtttcgagtcctggcttggtcagttagtatttctgtgtggagtttgcatgttttccctgtgttggcgtgggtttcccccacagtccaaacacatgcgctaaaggggaaccgatgaactaaattggacgtagtgtgtgtgtatgtgtatgggtgtttcccagtgctgggttgcagctagaagggcatccgctgtgtaaaacacatgctggaatagttggcggttcattccgctgtggcaacccctgataaaataggcgacccctgataaaaagggactaaaccaaaggaaaatgaatgagtgaatctttcattgcagccaaactaaaagaaacaccTGTATAATTCTTACAGACTTTTTaagaaagactttctccagaagacaatattagaaacatttctttgctctgttaaacatgacttggaaataagtgaagtttcacaaactaatttcgagaggagcacgaagctggtctctcatctataATTATTAGTTAACCCATCAGATTAATCCAAATtcactataagtagcctggctaaagctgtggtcacactgcacttttctccccatagacttccattcatacgcactcAAATGTGTCAGACCGAAAACGCaggctcgtgcgacaagttttgcagtttgctgcatgtgtgagaccaatcaaggatcaaaacatgacctctctgaacagaaatgtagatatggaccaattgctcgcttgtttaaatgtctaatcatcttgtttaaatgtctaatcaccttttcgcagcgccgtacgcaGTGTAAGGGAGTAACTAGTTGCACGTACGTAATTACGTTACgtgatttaattacaaaataaaagttacagTAATTcgttacagttactgagaaaaatgtgcaattaaattacagttacttgtaaaaatgttaaagattacacatggggttacatctaaaaatgttcttaaaaatctGGGATATGTTGAATAGTATTAATCTGCTgatttgcctgtttttgatatgcacgatgCCTTCTGCTAAGGTCATTTATTAAGGTGGTGCAattctgatgcttttgatttgcgGCGCACCAACGGTCATAAATCCCGGGGGGGGAACATGTCCTCGGtataaatgcttaaaaataatt
>TCONS_00055156
ATGAGTGAAACTGAAGACAATGACATTCTTGAGGACTCTGATACAGATGGAGGAGACGTTGAGATGGCTGATATGAtCGACTCTAAGACGGTGCAAACATGCAGAACTATGCCAAAAGGTTCAGATGTGCCAATAGTGGATTTCAATGGGAACCAGGACTTTCTGTTTTTCAATGATGGAAAGCGAAGGATCGACTTTGTTTTGGTGTATGAATATGAAGAGTCTAAAAATGGATCCAACAAAAAAGCCTCAGTTATAAGAAGAAAAAAAAGGCGAAGAGAGTTTTTCGAAGGAAGCCTGATGAATAAGGGATTGCATCTGGAAATGACACAATCCGTAGTGGATGAGAAGCTTTTCTTTGTGAAATTGCACATGCCGTTCGATGTTCTGTGTGCAAATGCTGAAGTCCTGCATATTAAACTGCCCATCAAATGCAATGACCTCCGTACACAATCCTCCAAGCACAACTGCTGCACTAAACCATTCTACCCTAATGAGGACGTGATTGGCAAAGAGCCGGACTACTTCACGGCGCCCTTCAGGAAAGATCTGCTCAACCGTTTTCAGCTAAAGGAAAGAGAGGGCAGGGAGTTATTTACACCGACCATGAGGAGCAGAATGGTGTATTATATCCTCAGCCGAGCAGAGTATGATATAAAAGGAGAAAATAAGAAGTTTGGGATCACAAAGCTGCTTGCTGGAGGCATCTATAAGGCTGCGTATCCATTACATGACTGCAGGTTTAATGTGAAGTCTAAAGAGGAGGACTGTCCCAATGAGCGTTATCTGCTGTACAGTGAGTGGGCGCATCCTAAAAACTTCTACAAGATGCAGCCGCTGGACCTGATCAGGAAGTATTTCGGTGAGAAAATCGGCATTTATTTCGCCTGGTTGGGTTTCTACACGTTCATGTTGAGCCTCGCTGCTGCGTTCGGACTCGGCTGTTTCATATACGGGTACAGAAGCAGAGAGAGCAGCACATGGAGCAAAGAGGTGTGTGACCCTGATATTGGTGGACAGATTGTCATGTGCCCGCAGTGTGATAATAACTGTCCGTATTGGCGACTCAACACCACGTGCGAGTCCTCGAAAAGGCTGTGTGTGTTTGATAACTTTGGGACTTTAGTGTTTGCTGTCTTCATGTCTGTTTGGGTGACTCTGTTCTTGGAGTTCTGGAAACGTTACCAGGCCAAACTGGAGTACAAGTGGGACACAGTGGAGTTTCAGCAGCAGGAGGAGCAGCCCAGGCCTGAATATGAGGCTAGATGCACCTATGAACGATTTAGTCCTATCACACAGTCCAATGAGAAGGTGCCGTATACAGCCTGTGGAAAGTGCATGAGAGTGTCGTGTGGCATTGGCACTGTGCTTTTCTGGATTCTGTTGATCGTAGCGTCAGTGGTCGGGGTGATTGTGTATCGTTTGGCGATGTTTATGGTGTTCTCGATGCAGCTGCGCTCTGACCTCAATAGAAAAGAGCTGGAGCCGTTCAGAGAGTACATCACGCCTCAGATGGCCACATCCATCACCGCCTCCATCATCaacgtcatcatcatcatgatcctCAATATTGTCTACGAGAAAGTGGCCGTCTGGATCACAGACTTCGAGCTGCCACGGACAAAAACAGAGTATGAGAACAGCCTGACGCTCAAGATGTTCCTCTTTCAGTTCGTCAATTTTTACTCGTCTTGTTTCTACATCGCCTTCTTCAAAGGGAAGATTGTTGGTTATCCAGGAGAACCCGTCTACTGGTTAGGAAAGTTTCGCAATGAGGAGTGTGATCCTGGTGGCTGTCTGACTGAACTGACCACTCAGCTGTCAATCATTATGACTGGAAAGGCCGTCTGGAACAACATACAGGAAGTCCTGCTGCCGTGGCTGAAGAATCTGATGTTTCGTCATTGCACCCAGGTGGGATCAGAAAAAGCGATTCCTCGCTGGGAACAAGACTATCAGCTCCAGCCGATGGGAACACTCGGCCTGTTTTATGAATATCTGGAGATGGTGATCCAGTTTGGCTTTGTGACTCTGTTTGTGGCGTCTTTCCCGCTGGCTCCTCTTCTGGCGCTGGTCAATAACCTGTTTGAGATCCGTGTGGACGCCTGGAAGTTCACCACTCAGTTTCGTAGGATTGTCCCAGAGAAAGCTCAGGACATCGGAGCCTGGCAGCCCATCCTGCAGGGGGTGACCATTCTGGCGGTGGTCACTAATacTGCTATCATCGCCTTCACTTCTGACATGATCCCTCGTCTGGTTTATTATTGGGCTTTTTCTGTCAGTCCTTACGTAGAGAACTCAAACCACACTATGGCCGGCTTCATCGACAGCTCTCTGTCTGTTTTCAACATTAGTCACTTTGACGATAAAACCAGACCTCGAGACGACATCAAACCGATCTGGTTTAACAACATCACCACGTGCCGGTATCGAGATTACAGGAATCCCCCTGATCATCAGAACCCATATCAGTTCAATGTTTATTACTGGCATGTCATCGCCGCCAAACTGGCTTTCATGATCGTGGTGGAGCACATTGTGTATTTCACCAAGTTCATGCTGTCCTACTTGATCCCGGATGTTCCCGAAGCTCTGAACGAGCAGATCAAACGTGAGCGATTCCTGACGCGGGACATCCTAAACAACAGCCAGTTGACAGACCTGATAAAACCCATCCGAGAGAAACTGCAGACGGACGTGGCAGACTTCACTGAGCTGGAGGAGCTGTTATAA

Function

symbol description
ano6 Predicted to enable chloride channel activity. Acts upstream of or within sprouting angiogenesis. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in plasma membrane. Human ortholog(s) of this gene implicated in Scott syndrome; ankylosing spondylitis; and inflammatory bowel disease. Orthologous to human ANO6 (anoctamin 6).

GO:

id name namespace
GO:0002040 sprouting angiogenesis biological_process
GO:0034767 positive regulation of ion transmembrane transport biological_process
GO:0030501 positive regulation of bone mineralization biological_process
GO:0007596 blood coagulation biological_process
GO:0055085 transmembrane transport biological_process
GO:0002407 dendritic cell chemotaxis biological_process
GO:1902476 chloride transmembrane transport biological_process
GO:0061588 calcium activated phospholipid scrambling biological_process
GO:0061589 calcium activated phosphatidylserine scrambling biological_process
GO:0061590 calcium activated phosphatidylcholine scrambling biological_process
GO:0005886 plasma membrane cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0005254 chloride channel activity molecular_function
GO:0046983 protein dimerization activity molecular_function

KEGG:

id description
ko04040 Ion channels

ZFIN:

id description
ZDB-GENE-081104-64 Predicted to enable chloride channel activity. Acts upstream of or within sprouting angiogenesis. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in plasma membrane. Human ortholog(s) of this gene implicated in Scott syndrome; ankylosing spondylitis; and inflammatory bowel disease. Orthologous to human ANO6 (anoctamin 6).

Ensembl:

ensembl_id ENSDARG00000061544

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00055155 False 4205 mRNA 0.44 18 1878573 1908179
TCONS_00055156 True 2733 mRNA 0.47 20 1880180 1914228

Neighbor

gene id symbol gene type direction distance location
XLOC_028406 NA coding downstream 22802 1848660 ~ 1855771 (-)
XLOC_028405 pwp1 coding downstream 39221 1825839 ~ 1839352 (-)
XLOC_028404 mrpl42 coding downstream 53737 1821637 ~ 1824836 (-)
XLOC_028403 ube2nb coding downstream 60258 1809562 ~ 1818315 (-)
XLOC_028402 nudt4b coding downstream 76954 1788748 ~ 1801619 (-)
XLOC_028408 NA coding upstream 1558 1915786 ~ 1979057 (-)
XLOC_028409 si:ch73-177h5.2 coding upstream 6783 1921011 ~ 1930024 (-)
XLOC_028410 FAR2 coding upstream 74232 1988460 ~ 2036620 (-)
XLOC_028411 cpsf6 coding upstream 126839 2041067 ~ 2059302 (-)
XLOC_028412 kcnc2 coding upstream 146296 2060524 ~ 2196928 (-)
XLOC_028393 NA non-coding downstream 618832 1054661 ~ 1259741 (-)
XLOC_028394 NA non-coding downstream 644337 1223164 ~ 1234236 (-)
XLOC_028392 NA non-coding downstream 842527 1028836 ~ 1036046 (-)
XLOC_028391 NA non-coding downstream 854873 1022316 ~ 1023700 (-)
XLOC_028417 NA non-coding upstream 477844 2392072 ~ 2440175 (-)
XLOC_028418 NA non-coding upstream 531529 2445757 ~ 2479720 (-)
XLOC_028422 NA non-coding upstream 749940 2664168 ~ 2666870 (-)
XLOC_028427 NA non-coding upstream 1336546 3250774 ~ 3257564 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000066_03664429_03674503 NA coding CI01000066 null 3664429 ~ 3674959 (+)