G1086147


Basic Information

Item Value
gene id G1086147
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 52536379 ~ 52536610 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1235746
ctacaaagtgtcgaaagcgttccacagggatgctggcccatgtcgactccaatgcttcccacagttgtgtcaagttggctggatgtcctttggatggtggaccattcttgatacacatggaaaactgttgagtgtgagaaACCCAgaagctttgcagttcttgacacaaaccagttgGGGCACCCTGCCCTACACCCTATGCACTTGTGGCAATCTGAGAGGATTTGACAGG

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1235746 True 232 lncRNA 0.50 1 52536379 52536610

Neighbor

gene id symbol gene type direction distance location
LOC110537755 LOC106567504 coding upstream 304151 52164071 ~ 52232228 (+)
LOC110537753 LOC106567505 coding upstream 411979 52087532 ~ 52124400 (+)
LOC110537754 LOC106603847 coding upstream 471207 52026941 ~ 52065243 (+)
LOC110537746 LOC106567511 coding upstream 948488 51547730 ~ 51587891 (+)
LOC110537744 LOC106567513 coding upstream 1085571 51414096 ~ 51450808 (+)
LOC110537762 LOC106567497 coding downstream 267617 52804227 ~ 52821797 (+)
LOC110537763 rnf14 coding downstream 300068 52836678 ~ 52842725 (+)
endou2 LOC106567496 coding downstream 306509 52843119 ~ 52851325 (+)
LOC110537765 LOC106567495 coding downstream 315041 52851651 ~ 52861272 (+)
LOC110537768 LOC106567493 coding downstream 468219 53004829 ~ 53132925 (+)
G1086113 NA non-coding upstream 22338 52513416 ~ 52514041 (+)
G1086112 NA non-coding upstream 23312 52512867 ~ 52513067 (+)
G1086110 NA non-coding upstream 25699 52510459 ~ 52510680 (+)
G1086090 NA non-coding upstream 40878 52495138 ~ 52495501 (+)
G1085968 NA non-coding upstream 118704 52416826 ~ 52417675 (+)
G1086152 NA non-coding downstream 1192 52537802 ~ 52538030 (+)
G1086161 NA non-coding downstream 7518 52544128 ~ 52544369 (+)
G1086381 NA non-coding downstream 311416 52848026 ~ 52848279 (+)
G1086390 NA non-coding downstream 333452 52870062 ~ 52870307 (+)
G1086400 NA non-coding downstream 342933 52879543 ~ 52879750 (+)
G1082266 NA other upstream 2855575 49679023 ~ 49680804 (+)
LOC110537713 LOC106567542 other upstream 3236032 49262142 ~ 49300347 (+)
G1081353 NA other upstream 3788880 48746955 ~ 48747499 (+)
G1077322 NA other upstream 6527770 46004151 ~ 46008609 (+)
nrgna NA other upstream 6616118 45900621 ~ 45920265 (+)
G1086237 LOC106567502 other downstream 112994 52649604 ~ 52657495 (+)
G1087914 NA other downstream 1573080 54109690 ~ 54148962 (+)
LOC110538908 LOC106603872 other downstream 1737696 54253719 ~ 54283905 (+)
G1091217 NA other downstream 4188997 56725607 ~ 56726003 (+)
G1091235 NA other downstream 4215808 56752418 ~ 56752947 (+)

Expression


Co-expression Network