Gene
RNA
| Item | Value |
|---|---|
| gene id | XLOC_000030 |
| gene name | NA |
| gene type | non-coding |
| species | zebrafish (Danio rerio) |
| category of species | model fish |
| Item | Value |
|---|---|
| chromosome id | NC_007112.7 |
| NCBI id | CM002885.2 |
| chromosome length | 59578282 |
| location | 1315289 ~ 1342237 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TCONS_00003008 | False | 429 | lncRNA | 0.46 | 2 | 1315289 | 1321953 |
| TCONS_00003009 | True | 221 | lncRNA | 0.43 | 2 | 1315289 | 1342237 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| XLOC_000029 | CR450787.2 | coding | upstream | 96484 | 1218691 ~ 1218805 (+) |
| XLOC_000028 | NA | coding | upstream | 281651 | 1015812 ~ 1033638 (+) |
| XLOC_000027 | n6amt1 | coding | upstream | 344338 | 961607 ~ 970951 (+) |
| XLOC_000026 | NA | coding | upstream | 403738 | 794976 ~ 911551 (+) |
| XLOC_000025 | jam2a | coding | upstream | 707042 | 594584 ~ 608247 (+) |
| XLOC_000031 | NA | coding | downstream | 16494 | 1358731 ~ 1360831 (+) |
| XLOC_000032 | NA | coding | downstream | 229610 | 1571847 ~ 1578251 (+) |
| XLOC_000033 | urp2 | coding | downstream | 257742 | 1599979 ~ 1614500 (+) |
| XLOC_000034 | NA | coding | downstream | 274966 | 1617203 ~ 1619314 (+) |
| XLOC_000035 | atp1a1a.4 | coding | downstream | 347538 | 1689775 ~ 1706159 (+) |
| XLOC_000024 | dre-mir-155 | non-coding | upstream | 738768 | 576444 ~ 576521 (+) |
| XLOC_000018 | NA | non-coding | upstream | 956727 | 355481 ~ 358562 (+) |
| XLOC_000043 | NA | non-coding | downstream | 659479 | 2001716 ~ 2005632 (+) |
| XLOC_000044 | NA | non-coding | downstream | 681172 | 2023409 ~ 2023645 (+) |
