XLOC_003019 (taar16b)


Basic Information

Item Value
gene id XLOC_003019
gene name taar16b
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 40588802 ~ 40589776 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00005535
ATGGAGGACAATACTCAAGAAATCCAATATTGCTTTCCGGATAACAATTTTTCATGTGTCAAAGAGATTATGCCTAAAGTGGAATATgtaattttgtacattttcatttctttattagcagtgtttgctgtgtttctaaacctgctggtgatcatctccatctctcacttcaGGCAGCTTCACACTCCAACTAACATGATTGTTCTCTCTCTAGCTGTAGCTGATCTGATTGTGGGACTGATTGTTATACCTTTAATGGGCATTAGGTACATAGAATCATGCTGGTACTTTGGAGAGgcattttgttttctatttttatttgttatttttatggtcGTTACAGCATCTCTTGGTAATTTAGTGTTTGTATCTTTAGATCGTTACATTGCTGTGAGTGATCCTCTGAGATATACAGTAAGGGTCACGACTGATAGAATTGTTATTTGCATTGttataaactggctttgctgtgGTGTATATTcttttattatattgtacaatACTATGTTCTACTCAAAGACACTAGACAGGTGTTATGGACACTGTACAATTTTTTTCAAGTTTGAACATTTTGTCACAGACCTTCTTGTCACTTTTGTCGCCCCTTCTTGTGTAATTATGTCTATATATGTGAAGATTTTTTGTGTTGCAAAACATCAGGCAAAGGTGGTAAATTCTGTGACAGGGGTCAGCAAGTCACAGCGAAAGGCAGGAAAAACTCTGGGTATTGTTGTAATTGTTTTCTTTATGTGTTGGATACCATATTATATAGTCACTCTTATTGAAGGAAATGAACTAACAGAATCTGTTGAACTTAATGTAACCTGCTGGATTTTGTACATGAATTCCTGTATGAATCCACTCATCTATTCTCTGTTTTATAAATGGTTTAGAATATCAGCCAAACACATTCTAACACTAAACATTTTGAAACCATCATCAGAATACTTCAATCTTTTCCCTGAGGATAAATGA
>TCONS_00005536
ctaaacctgctggtgatcatctccatctctcacttcaGGCAGCTTCACACTCCAACTAACATGATTGTTCTCTCTCTAGCTGTAGCTGATCTGATTGTGGGACTGATTGTTATACCTTTAATGGGCATTAGGTACATAGAATCATGCTGGTACTTTGGAGAGgcattttgttttctatttttatttgttatttttatggtcGTTACAGCATCTCTTGGTAATTTAGTGTTTGTATCTTTAGATCGTTACATTGCTGTGAGTGATCCTCTGAGATATACAGTAAGGGTCACGACTGATAGAATTGTTATTTGCATTGttataaactggctttgctgtgGTGTATATTcttttattatattgtacaatACTATGTTCTACTCAAAGACACTAGACAGGTGTTATGGACACTGTACAATTTTTTTCAAGTTTGAACATTTTGTCACAGACCTTCTTGTCACTTTTGTCGCCCCTTCTTGTGTAATTATGTCTATATATGTGAAGATTTTTTGTGTTGCAAAACATCAGGCAAAGGTGGTAAATTCTGTGACAGGGGTCAGCAAGTCACAGCGAAAGGCAGGAAAAACTCTGGGTATTGTTGTAATTGTTTTCTTTATGTGTTGGATACCATATTATATAGTCACTCTTATTGAAGGAAATGAACTAACAGAATCTGTTGAACTTAATGTAACCTGCTGGATTTTGTACATGAATTCCTGTATGAATCCACTCATCTAT

Function

symbol description
taar16b Predicted to enable trace-amine receptor activity. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in plasma membrane. Predicted to be integral component of membrane.

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000094626

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00005535 False 975 mRNA 0.35 1 40588802 40589776
TCONS_00005536 True 735 mRNA 0.36 1 40588907 40589641

Neighbor

gene id symbol gene type direction distance location
XLOC_003018 taar18b coding downstream 31592 40556203 ~ 40557210 (-)
XLOC_003017 taar18c coding downstream 35712 40552038 ~ 40553090 (-)
XLOC_003016 taar18f coding downstream 44879 40542910 ~ 40543923 (-)
XLOC_003015 CR396590.4 coding downstream 50755 40537440 ~ 40538047 (-)
XLOC_003014 taar18e coding downstream 51812 40535977 ~ 40536990 (-)
XLOC_003020 taar16a coding upstream 3667 40593443 ~ 40594447 (-)
XLOC_003021 taar16f coding upstream 22023 40611799 ~ 40612794 (-)
XLOC_003022 taar16g coding upstream 26796 40616572 ~ 40617567 (-)
XLOC_003023 NA coding upstream 31205 40620981 ~ 40621955 (-)
XLOC_003024 BX001050.1 coding upstream 151554 40741330 ~ 40741447 (-)
XLOC_003010 CR396590.6 non-coding downstream 67702 40520823 ~ 40521100 (-)
XLOC_003009 BX530037.3 non-coding downstream 71204 40516749 ~ 40517598 (-)
XLOC_003005 NA non-coding downstream 89593 40498159 ~ 40499209 (-)
XLOC_003004 NA non-coding downstream 98165 40489637 ~ 40490637 (-)
XLOC_003028 NA non-coding upstream 261361 40851137 ~ 40857097 (-)
XLOC_003029 CU929265.1 non-coding upstream 313345 40903121 ~ 40903237 (-)
XLOC_003040 NA non-coding upstream 1393133 41982909 ~ 41986595 (-)

Expression


Co-expression Network