LOC118938453


Basic Information

Item Value
gene id LOC118938453
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 27722180 ~ 27724417 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005035731.1
ggttcttcaaagaacttgtTAGAAGGtgggttcatcgaggaacctccgTTGTTGCTGGACTTCTTCCGGGAACTTCGCAATTACATCTGAAAACGATGGTGACAAGTTTGGATGCGACAACAAGTTAAAAAGGACTGGAGACAACAGCAGCGATTCTGCTCTTTCCCTACCTCTTCAATGAGGACCCGAGTGGCCTTTATGTCCGTGACAAGATTTCACCGCTCTTCACTCCTTTACTGGACATCGGCGGAAATCCATTTCACCAGGAGAGTGAAATCCCGCTGGCCTTTGATGGGGAGAACATTCACACCCTCGAGGACGTCCCCATGGGGCTCTGCTAGggctgtattttttattttccctTAAATTTCCCAAAAATGTCAGAAAAACACTTTTGTTCTTAAAGTTACTGTGTTCTGGGGAGAAGAGAATTTGGGGTGAAGTTACCAGGGCCAGGCATAAAGATGGCAAACTTCCTAACATAACTAAGTGGATACGTTATACACACTAAAGCTGAAAAATTTGCATTTAGCATCAAGTCTACGATGTTGTTAGTTTACCTATGATTCATTTTCAATGTATGTTGTTTTTATTGTACaccattattttatatttttaaaatgtcatgaaaagcactatacaaagtaaatgtattatttattatggCCTGACATGTCTGCAGAAATGTTGCAATTTTGTAGTGTTTTGTTTGGTAAATATTTTAATTCACATTTGTGGTGCCATTAATTAAAG

Function

NR:

description
PREDICTED: sterile alpha motif domain-containing protein 3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005035731.1 True 753 mRNA 0.39 3 27722180 27724417

Neighbor

gene id symbol gene type direction distance location
LOC118938440 NA coding upstream 91410 27258575 ~ 27630770 (+)
LOC118938450 LOC106604339 coding upstream 177487 27539872 ~ 27545029 (+)
LOC110487368 LOC106564416 coding upstream 183961 27439224 ~ 27538219 (+)
LOC110487369 LOC106595056 coding upstream 223759 27493088 ~ 27498421 (+)
LOC110487372 NA coding upstream 250546 27464627 ~ 27471634 (+)
LOC110485129 LOC106591690 coding downstream 43737 27768154 ~ 27788573 (+)
LOC118938246 LOC106595566 coding downstream 140423 27863508 ~ 27865760 (+)
LOC110487376 NA coding downstream 183368 27907785 ~ 27915756 (+)
LOC110485128 LOC106595049 coding downstream 190834 27915251 ~ 27943776 (+)
LOC118938251 NA coding downstream 220039 27944456 ~ 27950411 (+)
G1158355 NA non-coding upstream 114869 27606348 ~ 27607311 (+)
G1159353 NA non-coding upstream 147493 27573444 ~ 27574687 (+)
LOC118938442 NA non-coding upstream 309303 27409528 ~ 27415373 (+)
G1159434 NA non-coding downstream 54091 27778508 ~ 27784144 (+)
G1159437 NA non-coding downstream 56639 27781056 ~ 27786666 (+)
G1158343 NA non-coding downstream 76243 27800660 ~ 27801773 (+)
G1158351 NA non-coding downstream 85676 27810093 ~ 27811034 (+)
G1158371 NA non-coding downstream 89965 27814382 ~ 27814985 (+)
LOC110485126 NA other upstream 430962 27285432 ~ 27291404 (+)
LOC110487383 LOC106564416 other upstream 552386 26977083 ~ 27174368 (+)
G1158612 LOC106586052 other upstream 1504786 26163799 ~ 26217394 (+)
G1158563 NA other upstream 1606316 26110496 ~ 26115864 (+)
LOC110516920 LOC106578598 other upstream 1850777 25813029 ~ 25872772 (+)
G1159435 NA other downstream 55805 27780222 ~ 27786165 (+)
G1159631 NA other downstream 395248 28119665 ~ 28125638 (+)
G1159684 NA other downstream 528113 28252530 ~ 28257974 (+)

Expression


Co-expression Network