XLOC_030578 (TIMM22)


Basic Information

Item Value
gene id XLOC_030578
gene name TIMM22
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007116.7
NCBI id CM002889.2
chromosome length 72500376
location 62988916 ~ 62994386 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00059684
CACCACCACGGGTTGTTTCATTGTAGTTCTTTGTACTACTAAGCTAAAAGTCACCTCTCTTTCTGTCGAATCTGCAAAACCAGTTGTTATGTTATAAAGACATAAATAAATGCTACATAAATGCAGCTTgggaagaaaatataaaatatagacttctgtatttattttaggGACTTTATAAACTAGCGTTTACCAAGTTGCGGtttttcaattattatatatttttttctttaaatgttgaCGAATGTGCTCCTGTTTATCCTCCGTTTGACAGAATCACGCTGTCAACATGGCTGCGCCCGCAAAGAGCACGGATGCTTCACTTTCAGTCACTGCAGGTCATTCGGCAAACGTTTCATCCGCGGAAAATGTGTCTCTGCAATACAGTCTTATTTTGGACCATCTTATCGGCGACAAAAGACAGATTAAAGACTTAAATCCGACTGTCATGGGGGCTTTACCGAGTCCCCAGAAAACAGATGAGCAGAAGATGATCGAGCGGGGAATGGAGAGCTGCGCCTTTAAATCCCTCATAGCGTGTGTCGGAGGGTTTGTTCTGGGAGGTGCTTTTGGAGTCTTCACAGCCGGCATTGATGCAAATGTTGGGCTTGATCCCAAAGACCCCTTAAGGACCCCCACAGCAAGAGAGGTGCTGAAAGACATGGGTCAGAGGGGAATGTCGTATGCCAAAAACTTTGCGATTGTGGGTGCAATGTTTTCATGCACAGAGTGTCTCATAGAATCACATCGTGGGAAGTCTGACTGGAAGAATGCAGTATACAGTGGCTGTATTACAGGAGGTGCCATCGGATTCAGAGCCGGCCTTAAAGCTGGAGTTCTGGGCTGTGGAGGCTTTGCTGCCTTCTCTGCTGCCATTGAATATTACCTCCGATGA

Function

symbol description
timm22 Human ortholog(s) of this gene implicated in combined oxidative phosphorylation deficiency 43. Orthologous to human TIMM22 (translocase of inner mitochondrial membrane 22).

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-101021-3 Human ortholog(s) of this gene implicated in combined oxidative phosphorylation deficiency 43. Orthologous to human TIMM22 (translocase of inner mitochondrial membrane 22).

Ensembl:

ensembl_id ENSDARG00000091413

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00059684 True 895 mRNA 0.44 4 62988916 62994386

Neighbor

gene id symbol gene type direction distance location
XLOC_030577 AL928675.1 coding upstream 101673 62887128 ~ 62887243 (+)
XLOC_030576 zswim7 coding upstream 217483 62726349 ~ 62771433 (+)
XLOC_030575 nanos2 coding upstream 265243 62723233 ~ 62723673 (+)
XLOC_030572 CR394528.1 coding upstream 276296 62642924 ~ 62712620 (+)
XLOC_030579 NA coding downstream 19592 63013978 ~ 63014690 (+)
XLOC_030580 CR339044.1 coding downstream 203569 63197955 ~ 63206468 (+)
XLOC_030581 NA coding downstream 293891 63288277 ~ 63294943 (+)
XLOC_030582 si:ch73-376l24.2 coding downstream 308274 63302660 ~ 63319502 (+)
XLOC_030583 si:ch73-376l24.3 coding downstream 327707 63322093 ~ 63340340 (+)
XLOC_030573 NA non-coding upstream 278188 62643206 ~ 62710728 (+)
XLOC_030574 BX510960.1 non-coding upstream 284512 62699748 ~ 62704404 (+)
XLOC_030567 BX511157.1 non-coding upstream 902982 62085817 ~ 62085934 (+)
XLOC_030588 CU856222.1 non-coding downstream 745477 63739863 ~ 63741137 (+)
XLOC_030591 NA non-coding downstream 881822 63876208 ~ 63880022 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000081_00101187_00103913 TIMM22 coding CI01000081 null 100838 ~ 104062 (-)