XLOC_030580 (CR339044.1)


Basic Information

Item Value
gene id XLOC_030580
gene name CR339044.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007116.7
NCBI id CM002889.2
chromosome length 72500376
location 63197955 ~ 63206468 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00059685
CACTTGGTGGTGAGAGTGCCGAAAGAGCGGCAGGCCTCAGCGTAGGCCGCCATAGAGCCGCACACCTGGGCCTTGCGGTGGTTGTAGCAGCCGTCCATGTAGCATGACTGGTAAAAAGGATGAGGGTCCAGCAGACCGTGGCAGGGCTGGAAGAAACCTTTCAAATCGCTCTGAGCGAGCTCCAGTGCACTGACAGCAGGTTTTCCACGAGAGGTGATGTAGTCATCTGTGGGATCCCCGTTAAAGTTCCCACACAGTCCACACACCTTGTTCTGTAGCCGTGGACCCATTGTAATGCTGAGGGTGTTGAATCGATTATAACGAACCTGGATGTCCTGAGGAGTGTCGATCACCAGAAATCCCTCAGATGTGGATACTCTTGTCATTAGACCTGTGACAAAAGTGTTGCCTGAGATGAGAATGTTCTCCTCGTTGATGTAGAGATAAGCATGGGAGATGGTGGTTAGGTTGGGTGTGCTCCATTTGTCGAAATTGGCAATGAGCTGAAAAGATAACTCTGGCAGCTTGTGGCAGATTGTTGAGAGAACAAACGAGCATGAGGCGGGTAAACGGAGAGAAGCGCCATCAAAAGTGCGGAAGACGCCACCGCCGGACGCCACGCAGTGCTGATTCCGTCTGGCAAAGCATCCTCGCACACCATGCCGCAGGACACACTCCTCCTCCGCTTTACATCGCCGTGGGTCGCACTGAATCAGATTCCGGCCAATACACTGGCAGCGTTTAGTGCAGTCACTGTTCCAGAACAACTGCTTAGGCTGAGAAAGACACAAGTAACTCATATCAAATGGTACAAATTTaagatattaaacaaataataaacaaatattgatACC

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000104364

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00059685 True 854 processed_transcript 0.50 3 63197955 63206468

Neighbor

gene id symbol gene type direction distance location
XLOC_030579 NA coding upstream 183265 63013978 ~ 63014690 (+)
XLOC_030578 TIMM22 coding upstream 203569 62988916 ~ 62994386 (+)
XLOC_030577 AL928675.1 coding upstream 310712 62887128 ~ 62887243 (+)
XLOC_030576 zswim7 coding upstream 426522 62726349 ~ 62771433 (+)
XLOC_030575 nanos2 coding upstream 474282 62723233 ~ 62723673 (+)
XLOC_030581 NA coding downstream 81809 63288277 ~ 63294943 (+)
XLOC_030582 si:ch73-376l24.2 coding downstream 96192 63302660 ~ 63319502 (+)
XLOC_030583 si:ch73-376l24.3 coding downstream 115625 63322093 ~ 63340340 (+)
XLOC_030584 si:ch73-376l24.4 coding downstream 134169 63340637 ~ 63353746 (+)
XLOC_030585 ttf1 coding downstream 153052 63359520 ~ 63387228 (+)
XLOC_030572 CR394528.1 non-coding upstream 485335 62642924 ~ 62712620 (+)
XLOC_030573 NA non-coding upstream 487227 62643206 ~ 62710728 (+)
XLOC_030574 BX510960.1 non-coding upstream 493551 62699748 ~ 62704404 (+)
XLOC_030588 CU856222.1 non-coding downstream 533395 63739863 ~ 63741137 (+)
XLOC_030591 NA non-coding downstream 669740 63876208 ~ 63880022 (+)
XLOC_030592 NA non-coding downstream 1027191 64233659 ~ 64236297 (+)
XLOC_030593 NA non-coding downstream 1031874 64238342 ~ 64241354 (+)

Expression


Co-expression Network