G1159562


Basic Information

Item Value
gene id G1159562
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 28725909 ~ 28726413 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1322372
gaactcttattctctacagaagtgatacctcctagctgttgagttagcgaccgcaggttaagaaggaacagacagagtatcccgtctatcacacaacgaagttactacaacgtatccaattgacaaccagagacattcttcaaaggacagaggactcggtttggcaacacggccttccatctaccaccaacctactgaagcacagctcagagtaaatatttattgcattttccttttccaaatgggcggtaatttagaatgcataagatactgtatttacgataacACAGCTTTGCCTTTGTTCCTGTCTTCCTTctctttcactcaacccagcccgttttcctatgacgtaatcaagttatgatttaattatgtgtatatgaattatgtgtgattagttaggtatttagtaaataaatgattaaacccaaatttgtattgctgattcaattTGTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1322372 True 456 lncRNA 0.38 2 28725909 28726413

Neighbor

gene id symbol gene type direction distance location
LOC118938259 LOC106566139 coding upstream 4173 28716818 ~ 28721736 (+)
LOC110487366 NA coding upstream 12120 28707695 ~ 28713789 (+)
LOC118938254 NA coding upstream 117216 28604589 ~ 28608693 (+)
LOC110487378 LOC106613297 coding upstream 122339 28595965 ~ 28603570 (+)
LOC110487355 LOC106561190 coding upstream 225240 28472333 ~ 28500669 (+)
LOC118938260 LOC106593417 coding downstream 25099 28751512 ~ 28753479 (+)
LOC110485131 LOC106571816 coding downstream 41803 28768216 ~ 28774940 (+)
LOC110486062 LOC106585334 coding downstream 133122 28859535 ~ 28860605 (+)
rrp36 rrp36 coding downstream 441988 29168401 ~ 29172521 (+)
si:ch211-126j24.1 LOC106585260 coding downstream 540205 29266618 ~ 29370947 (+)
G1159547 NA non-coding upstream 25666 28660567 ~ 28700243 (+)
G1159847 NA non-coding upstream 54580 28670046 ~ 28671329 (+)
G1159821 NA non-coding upstream 93701 28630299 ~ 28632208 (+)
G1159781 LOC106561441 non-coding upstream 173106 28551842 ~ 28552803 (+)
G1159893 NA non-coding downstream 37293 28763706 ~ 28764120 (+)
G1159897 LOC106591026 non-coding downstream 57017 28783430 ~ 28784093 (+)
G1159901 NA non-coding downstream 60134 28786547 ~ 28788374 (+)
G1159915 NA non-coding downstream 76842 28803255 ~ 28803498 (+)
G1159922 LOC106586027 non-coding downstream 87752 28814165 ~ 28814490 (+)
LOC110513252 NA other upstream 27088 28338501 ~ 28698821 (+)
G1159684 NA other upstream 467935 28252530 ~ 28257974 (+)
G1159631 NA other upstream 600271 28119665 ~ 28125638 (+)
LOC118938246 LOC106595566 other upstream 860202 27863508 ~ 27865760 (+)
G1159924 NA other downstream 92321 28818734 ~ 28819448 (+)
G1161908 NA other downstream 572345 29298758 ~ 29299656 (+)
G1162364 NA other downstream 767949 29494362 ~ 29494902 (+)
G1162753 NA other downstream 1104341 29830754 ~ 29831296 (+)

Expression


Co-expression Network