G1161931


Basic Information

Item Value
gene id G1161931
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 29347229 ~ 29347532 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1325100
aatacttatctcaatactttgttatataccctttgttggcaatgacagaggtcaaacgttttctgtaagtcttcacaaggttttcacacactgttaaaggtattttgtcccattcctccatgcagatctcctctagagcagtgatgtttcggggctgttgctgggcaacacggactttcaactccctccaaagattttctatggggttaagatctggagactggctaggccactccaggaccttgaaaggcttcttatgaagccactcctttgttgcccgggcggtgtgtttgggatcattgtc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1325100 True 304 lncRNA 0.45 1 29347229 29347532

Neighbor

gene id symbol gene type direction distance location
rrp36 rrp36 coding upstream 174708 29168401 ~ 29172521 (+)
LOC110486062 LOC106585334 coding upstream 486624 28859535 ~ 28860605 (+)
LOC110485131 LOC106571816 coding upstream 572289 28768216 ~ 28774940 (+)
LOC118938260 LOC106593417 coding upstream 593750 28751512 ~ 28753479 (+)
LOC118938259 LOC106566139 coding upstream 625493 28716818 ~ 28721736 (+)
LOC110486069 klc4 coding downstream 25769 29373301 ~ 29409473 (+)
LOC110486070 hebp1 coding downstream 71831 29419363 ~ 29436445 (+)
LOC110486071 LOC106564807 coding downstream 96591 29444123 ~ 29485813 (+)
LOC110486072 LOC106585018 coding downstream 150530 29498062 ~ 29591905 (+)
LOC110486077 LOC106564801 coding downstream 308024 29655556 ~ 29706148 (+)
si:ch211-126j24.1 LOC106585260 non-coding upstream 33265 29266618 ~ 29370947 (+)
G1161915 NA non-coding upstream 41504 29305423 ~ 29305725 (+)
G1161914 NA non-coding upstream 42728 29304275 ~ 29304501 (+)
G1161898 NA non-coding upstream 54598 29292321 ~ 29292631 (+)
G1161894 NA non-coding upstream 62312 29284634 ~ 29284917 (+)
G1161933 NA non-coding downstream 626 29348158 ~ 29348422 (+)
G1161937 NA non-coding downstream 14274 29361806 ~ 29362159 (+)
G1161961 NA non-coding downstream 90267 29437799 ~ 29438918 (+)
G1161908 NA other upstream 47573 29298758 ~ 29299656 (+)
G1159924 NA other upstream 527781 28818734 ~ 28819448 (+)
LOC110513252 NA other upstream 648408 28338501 ~ 28698821 (+)
LOC110487355 LOC106561190 other upstream 848023 28472333 ~ 28500669 (+)
G1159684 NA other upstream 1089255 28252530 ~ 28257974 (+)
G1162364 NA other downstream 146830 29494362 ~ 29494902 (+)
G1162753 NA other downstream 483222 29830754 ~ 29831296 (+)
LOC110486104 chchd5 other downstream 1766779 31113781 ~ 31119681 (+)
LOC110486134 LOC106600876 other downstream 2654219 32001741 ~ 32159164 (+)

Expression


Co-expression Network