Gene
RNA
| Item | Value |
|---|---|
| gene id | G1164993 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 31918748 ~ 31919040 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1328585 | True | 293 | lncRNA | 0.39 | 1 | 31918748 | 31919040 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| il2rb2 | il2rb2 | coding | upstream | 209008 | 31701964 ~ 31709740 (+) |
| LOC110487528 | tex33 | coding | upstream | 226480 | 31691533 ~ 31692268 (+) |
| LOC110486131 | LOC105029658 | coding | upstream | 228543 | 31684474 ~ 31690205 (+) |
| LOC110486130 | LOC106607449 | coding | upstream | 244858 | 31666240 ~ 31673890 (+) |
| LOC110486128 | LOC106607447 | coding | upstream | 268907 | 31642382 ~ 31649841 (+) |
| LOC110486134 | LOC106600876 | coding | downstream | 82701 | 32001741 ~ 32159164 (+) |
| LOC110486136 | cdc27 | coding | downstream | 349176 | 32268216 ~ 32289324 (+) |
| LOC110486139 | LOC106607458 | coding | downstream | 371301 | 32290341 ~ 32370648 (+) |
| LOC100136790 | scn4aa | coding | downstream | 543171 | 32462211 ~ 32505925 (+) |
| LOC118938569 | NA | coding | downstream | 563498 | 32482538 ~ 32482591 (+) |
| G1164619 | NA | non-coding | upstream | 107749 | 31718603 ~ 31810999 (+) |
| G1164620 | NA | non-coding | upstream | 111200 | 31717508 ~ 31807548 (+) |
| G1164622 | LOC106600878 | non-coding | upstream | 171426 | 31742726 ~ 31747322 (+) |
| G1164618 | NA | non-coding | upstream | 264045 | 31654315 ~ 31654703 (+) |
| G1164612 | NA | non-coding | upstream | 282889 | 31635518 ~ 31635859 (+) |
| G1165223 | NA | non-coding | downstream | 234911 | 32153951 ~ 32154176 (+) |
| G1165325 | NA | non-coding | downstream | 241254 | 32160294 ~ 32161004 (+) |
| G1165355 | NA | non-coding | downstream | 263693 | 32182733 ~ 32184968 (+) |
| G1165356 | NA | non-coding | downstream | 266438 | 32185478 ~ 32236850 (+) |
| LOC110486104 | chchd5 | other | upstream | 799071 | 31113781 ~ 31119681 (+) |
| G1162753 | NA | other | upstream | 2087452 | 29830754 ~ 29831296 (+) |
| G1162364 | NA | other | upstream | 2423846 | 29494362 ~ 29494902 (+) |
| si:ch211-126j24.1 | LOC106585260 | other | upstream | 2547801 | 29266618 ~ 29370947 (+) |
| G1161908 | NA | other | upstream | 2619092 | 29298758 ~ 29299656 (+) |
| ifn2 | ifn2 | other | downstream | 796216 | 32714937 ~ 32722676 (+) |
| LOC110486146 | LOC106607468 | other | downstream | 1310073 | 33001356 ~ 33230495 (+) |
| G1166318 | NA | other | downstream | 1320913 | 33239953 ~ 33249208 (+) |
| G1166779 | NA | other | downstream | 1871600 | 33790640 ~ 33803665 (+) |
