G1166369


Basic Information

Item Value
gene id G1166369
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 33332409 ~ 33332663 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1330092
attatacgtgaaataatctctctgtaaacaattgttggagaaattacttgtgtcatgcacaaagtagatgtcctaaccgacttgccaaaactatagtttgttaacaagaaaattgtggagtggttgaaaaacgagttttaatgactcccacCTAAGTGTTTGTagacttcctacttcaactgtatgtatgtgtagcaTGTGACATTAAcaggatcatatcaaggatagcgtcacaaatgaatacataaatatcac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1330092 True 255 lncRNA 0.35 1 33332409 33332663

Neighbor

gene id symbol gene type direction distance location
LOC110486150 psd3 coding upstream 5375 33320635 ~ 33327034 (+)
LOC110485152 LOC106607471 coding upstream 29983 33296758 ~ 33304976 (+)
LOC110486148 LOC106607470 coding upstream 47602 33271079 ~ 33284807 (+)
LOC110486149 LOC106600856 coding upstream 77287 33249232 ~ 33255122 (+)
LOC110486146 LOC106607468 coding upstream 101914 33001356 ~ 33230495 (+)
csf-3 csf-3 coding downstream 2784 33335447 ~ 33339727 (+)
LOC110486158 LOC106607478 coding downstream 305146 33637809 ~ 33653835 (+)
LOC110486161 LOC106607482 coding downstream 437776 33770439 ~ 33783009 (+)
LOC110485153 LOC106607489 coding downstream 886182 34218845 ~ 34221786 (+)
LOC110486176 LOC106607492 coding downstream 932721 34265384 ~ 34272808 (+)
G1166364 NA non-coding upstream 13001 33319199 ~ 33319408 (+)
G1166357 NA non-coding upstream 19217 33312887 ~ 33313192 (+)
G1166354 NA non-coding upstream 24586 33307519 ~ 33307823 (+)
G1166318 NA non-coding upstream 83201 33239953 ~ 33249208 (+)
G1166571 NA non-coding downstream 13298 33345961 ~ 33346185 (+)
G1166573 LOC106607474 non-coding downstream 16157 33348820 ~ 33366167 (+)
G1166582 NA non-coding downstream 34981 33367644 ~ 33367905 (+)
G1166575 LOC106607474 non-coding downstream 36573 33369236 ~ 33369958 (+)
G1166584 NA non-coding downstream 38492 33371155 ~ 33371384 (+)
ifn2 ifn2 other upstream 609947 32714937 ~ 32722676 (+)
LOC110486134 LOC106600876 other upstream 1221676 32001741 ~ 32159164 (+)
LOC110486104 chchd5 other upstream 2212732 31113781 ~ 31119681 (+)
G1166779 NA other downstream 457977 33790640 ~ 33803665 (+)
LOC110486188 LOC107665142 other downstream 1348525 34680909 ~ 34687670 (+)
G1169121 LOC106607257 other downstream 2657193 35989856 ~ 35992600 (+)
G1169207 NA other downstream 2834965 36167628 ~ 36168331 (+)
G1169208 NA other downstream 2837233 36169896 ~ 36171571 (+)

Expression


Co-expression Network