Gene
RNA
| Item | Value |
|---|---|
| gene id | G1166571 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 33345961 ~ 33346185 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1330315 | True | 225 | lncRNA | 0.40 | 1 | 33345961 | 33346185 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| csf-3 | csf-3 | coding | upstream | 6234 | 33335447 ~ 33339727 (+) |
| LOC110486150 | psd3 | coding | upstream | 18927 | 33320635 ~ 33327034 (+) |
| LOC110485152 | LOC106607471 | coding | upstream | 43535 | 33296758 ~ 33304976 (+) |
| LOC110486148 | LOC106607470 | coding | upstream | 61154 | 33271079 ~ 33284807 (+) |
| LOC110486149 | LOC106600856 | coding | upstream | 90839 | 33249232 ~ 33255122 (+) |
| LOC110486158 | LOC106607478 | coding | downstream | 291624 | 33637809 ~ 33653835 (+) |
| LOC110486161 | LOC106607482 | coding | downstream | 424254 | 33770439 ~ 33783009 (+) |
| LOC110485153 | LOC106607489 | coding | downstream | 872660 | 34218845 ~ 34221786 (+) |
| LOC110486176 | LOC106607492 | coding | downstream | 919199 | 34265384 ~ 34272808 (+) |
| LOC110486177 | LOC106607493 | coding | downstream | 931051 | 34277236 ~ 34292574 (+) |
| G1166369 | NA | non-coding | upstream | 13298 | 33332409 ~ 33332663 (+) |
| G1166364 | NA | non-coding | upstream | 26553 | 33319199 ~ 33319408 (+) |
| G1166357 | NA | non-coding | upstream | 32769 | 33312887 ~ 33313192 (+) |
| G1166354 | NA | non-coding | upstream | 38138 | 33307519 ~ 33307823 (+) |
| G1166573 | LOC106607474 | non-coding | downstream | 2635 | 33348820 ~ 33366167 (+) |
| G1166582 | NA | non-coding | downstream | 21459 | 33367644 ~ 33367905 (+) |
| G1166575 | LOC106607474 | non-coding | downstream | 23051 | 33369236 ~ 33369958 (+) |
| G1166584 | NA | non-coding | downstream | 24970 | 33371155 ~ 33371384 (+) |
| G1166591 | NA | non-coding | downstream | 75115 | 33421300 ~ 33459483 (+) |
| G1166318 | NA | other | upstream | 96753 | 33239953 ~ 33249208 (+) |
| LOC110486146 | LOC106607468 | other | upstream | 115478 | 33001356 ~ 33230495 (+) |
| ifn2 | ifn2 | other | upstream | 623499 | 32714937 ~ 32722676 (+) |
| LOC110486134 | LOC106600876 | other | upstream | 1235228 | 32001741 ~ 32159164 (+) |
| LOC110486104 | chchd5 | other | upstream | 2226284 | 31113781 ~ 31119681 (+) |
| G1166779 | NA | other | downstream | 444455 | 33790640 ~ 33803665 (+) |
| LOC110486188 | LOC107665142 | other | downstream | 1335003 | 34680909 ~ 34687670 (+) |
| G1169121 | LOC106607257 | other | downstream | 2643671 | 35989856 ~ 35992600 (+) |
| G1169207 | NA | other | downstream | 2821443 | 36167628 ~ 36168331 (+) |
| G1169208 | NA | other | downstream | 2823711 | 36169896 ~ 36171571 (+) |
