G1166802


Basic Information

Item Value
gene id G1166802
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 33724350 ~ 33724775 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1330590
gacagacagacaccgagtCGTCCCCAAGAGGAGAGGCTACCATCAGAGAGAGCACTACCACTGCTCCTTGCGCCACGGCAAAGAGATGACACTCACATGGACATGTGTACGTCTCCAAATACTTATGGATCGCAGCGGTTTTGTACagagagagagagcgaggccaTTAAACAGAGCAGAGAAGCGGATCACTAGCCATTCAATCATGCAGACCAGACCCTTGTCCTAGGAGCCTTCTCCTGTTCTGTTCCCGACCACTGTCCTAGATCCTCATTGGGGACTTGAGGAAAATGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1330590 True 295 lncRNA 0.52 2 33724350 33724775

Neighbor

gene id symbol gene type direction distance location
LOC110486158 LOC106607478 coding upstream 70515 33637809 ~ 33653835 (+)
csf-3 csf-3 coding upstream 384623 33335447 ~ 33339727 (+)
LOC110486150 psd3 coding upstream 397316 33320635 ~ 33327034 (+)
LOC110485152 LOC106607471 coding upstream 421924 33296758 ~ 33304976 (+)
LOC110486148 LOC106607470 coding upstream 439543 33271079 ~ 33284807 (+)
LOC110486161 LOC106607482 coding downstream 45664 33770439 ~ 33783009 (+)
LOC110485153 LOC106607489 coding downstream 494070 34218845 ~ 34221786 (+)
LOC110486176 LOC106607492 coding downstream 540609 34265384 ~ 34272808 (+)
LOC110486177 LOC106607493 coding downstream 552461 34277236 ~ 34292574 (+)
LOC110486178 LOC106607494 coding downstream 584679 34309454 ~ 34366289 (+)
G1166783 NA non-coding upstream 30998 33692480 ~ 33693352 (+)
G1166755 NA non-coding upstream 79723 33644424 ~ 33644627 (+)
G1166735 NA non-coding upstream 116771 33607354 ~ 33607579 (+)
G1166690 NA non-coding upstream 178820 33543113 ~ 33545530 (+)
G1166590 LOC100286406 non-coding upstream 292008 33423972 ~ 33432342 (+)
G1166809 NA non-coding downstream 8578 33733353 ~ 33733843 (+)
G1167108 NA non-coding downstream 108414 33833189 ~ 33833393 (+)
G1167110 NA non-coding downstream 109288 33834063 ~ 33834294 (+)
G1167184 NA non-coding downstream 170887 33895662 ~ 33944609 (+)
G1167340 NA non-coding downstream 317366 34042141 ~ 34042660 (+)
G1166318 NA other upstream 475142 33239953 ~ 33249208 (+)
LOC110486146 LOC106607468 other upstream 493867 33001356 ~ 33230495 (+)
ifn2 ifn2 other upstream 1001888 32714937 ~ 32722676 (+)
LOC110486134 LOC106600876 other upstream 1613617 32001741 ~ 32159164 (+)
LOC110486104 chchd5 other upstream 2604673 31113781 ~ 31119681 (+)
G1166779 NA other downstream 65865 33790640 ~ 33803665 (+)
LOC110486188 LOC107665142 other downstream 956413 34680909 ~ 34687670 (+)
G1169121 LOC106607257 other downstream 2265081 35989856 ~ 35992600 (+)
G1169207 NA other downstream 2442853 36167628 ~ 36168331 (+)
G1169208 NA other downstream 2445121 36169896 ~ 36171571 (+)

Expression


Co-expression Network