Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1330590 |
| length | 295 |
| lncRNA type | inter_gene |
| GC content | 0.52 |
| exon number | 2 |
| gene id | G1166802 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 33724350 ~ 33724775 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1330571 | lncRNA | upstream | 30998 | 33692480 ~ 33693352 (+) | True | G1166783 |
| TU1330531 | lncRNA | upstream | 79723 | 33644424 ~ 33644627 (+) | True | G1166755 |
| TU1330509 | lncRNA | upstream | 116771 | 33607354 ~ 33607579 (+) | True | G1166735 |
| TU1330463 | lncRNA | upstream | 178820 | 33543113 ~ 33545530 (+) | True | G1166690 |
| TU1330357 | lncRNA | upstream | 292008 | 33427285 ~ 33432342 (+) | True | G1166590 |
| TU1330597 | lncRNA | downstream | 8578 | 33733353 ~ 33733843 (+) | True | G1166809 |
| TU1330562 | lncRNA | downstream | 59044 | 33783819 ~ 33790260 (+) | True | G1166778 |
| TU1330948 | lncRNA | downstream | 108414 | 33833189 ~ 33833393 (+) | True | G1167108 |
| TU1330950 | lncRNA | downstream | 109288 | 33834063 ~ 33834294 (+) | True | G1167110 |
| TU1331026 | lncRNA | downstream | 170887 | 33895662 ~ 33944609 (+) | True | G1167184 |
| XM_021557554.2 | mRNA | upstream | 70515 | 33637809 ~ 33653835 (+) | False | LOC110486158 |
| XM_036940808.1 | mRNA | upstream | 70515 | 33637809 ~ 33653835 (+) | False | LOC110486158 |
| XM_036940809.1 | mRNA | upstream | 70515 | 33638047 ~ 33653835 (+) | True | LOC110486158 |
| XM_036939716.1 | mRNA | upstream | 384623 | 33336015 ~ 33339727 (+) | True | csf-3 |
| XM_021556174.2 | mRNA | upstream | 384628 | 33335690 ~ 33339722 (+) | False | csf-3 |
| XM_021557562.2 | mRNA | downstream | 45664 | 33770439 ~ 33783009 (+) | False | LOC110486161 |
| XM_021557563.2 | mRNA | downstream | 45664 | 33770439 ~ 33783009 (+) | True | LOC110486161 |
| XM_021556220.2 | mRNA | downstream | 494070 | 34218845 ~ 34221786 (+) | False | LOC110485153 |
| XM_021557592.2 | mRNA | downstream | 540609 | 34265384 ~ 34272808 (+) | False | LOC110486176 |
| XM_036940839.1 | mRNA | downstream | 541688 | 34266463 ~ 34272808 (+) | True | LOC110486176 |
| TU1330025 | other | upstream | 475142 | 33239953 ~ 33249208 (+) | False | G1166318 |
| TU1329888 | other | upstream | 493867 | 33229113 ~ 33230483 (+) | True | LOC110486146 |
| TU1329495 | other | upstream | 1001888 | 32715256 ~ 32722462 (+) | True | ifn2 |
| TU1328699 | other | upstream | 1613617 | 32001751 ~ 32110733 (+) | False | LOC110486134 |
| TU1327390 | other | upstream | 2604673 | 31114311 ~ 31119677 (+) | True | LOC110486104 |
| TU1330567 | other | downstream | 65865 | 33790640 ~ 33803665 (+) | True | G1166779 |
| TU1331612 | other | downstream | 956413 | 34681188 ~ 34687650 (+) | True | LOC110486188 |
| TU1333280 | other | downstream | 2265081 | 35989856 ~ 35992600 (+) | True | G1169121 |
| TU1333368 | other | downstream | 2442853 | 36167628 ~ 36168331 (+) | True | G1169207 |
| TU1333369 | other | downstream | 2445121 | 36169896 ~ 36171571 (+) | True | G1169208 |
