Gene
RNA
| Item | Value |
|---|---|
| gene id | G1167609 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 34274734 ~ 34274961 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1331479 | True | 228 | lncRNA | 0.50 | 1 | 34274734 | 34274961 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110486176 | LOC106607492 | coding | upstream | 1926 | 34265384 ~ 34272808 (+) |
| LOC110485153 | LOC106607489 | coding | upstream | 52948 | 34218845 ~ 34221786 (+) |
| LOC110486161 | LOC106607482 | coding | upstream | 491725 | 33770439 ~ 33783009 (+) |
| LOC110486158 | LOC106607478 | coding | upstream | 620899 | 33637809 ~ 33653835 (+) |
| csf-3 | csf-3 | coding | upstream | 935007 | 33335447 ~ 33339727 (+) |
| LOC110486177 | LOC106607493 | coding | downstream | 2275 | 34277236 ~ 34292574 (+) |
| LOC110486178 | LOC106607494 | coding | downstream | 34493 | 34309454 ~ 34366289 (+) |
| LOC110486179 | LOC106607495 | coding | downstream | 92336 | 34367297 ~ 34372229 (+) |
| LOC110486182 | LOC106607497 | coding | downstream | 148472 | 34423433 ~ 34429172 (+) |
| LOC110486181 | LOC106607498 | coding | downstream | 154372 | 34429333 ~ 34443615 (+) |
| G1167585 | NA | non-coding | upstream | 23021 | 34251452 ~ 34251713 (+) |
| G1167558 | NA | non-coding | upstream | 45945 | 34228560 ~ 34228789 (+) |
| G1167508 | NA | non-coding | upstream | 50155 | 34224113 ~ 34224579 (+) |
| G1167507 | NA | non-coding | upstream | 50959 | 34223572 ~ 34223775 (+) |
| G1167506 | NA | non-coding | upstream | 51280 | 34222989 ~ 34223454 (+) |
| G1167622 | NA | non-coding | downstream | 26861 | 34301822 ~ 34302111 (+) |
| G1167647 | NA | non-coding | downstream | 97932 | 34372893 ~ 34373228 (+) |
| G1167648 | NA | non-coding | downstream | 98363 | 34373324 ~ 34373867 (+) |
| G1167652 | NA | non-coding | downstream | 102437 | 34377398 ~ 34377621 (+) |
| G1166779 | NA | other | upstream | 471069 | 33790640 ~ 33803665 (+) |
| G1166318 | NA | other | upstream | 1025526 | 33239953 ~ 33249208 (+) |
| LOC110486146 | LOC106607468 | other | upstream | 1044251 | 33001356 ~ 33230495 (+) |
| ifn2 | ifn2 | other | upstream | 1552272 | 32714937 ~ 32722676 (+) |
| LOC110486134 | LOC106600876 | other | upstream | 2164001 | 32001741 ~ 32159164 (+) |
| LOC110486188 | LOC107665142 | other | downstream | 406227 | 34680909 ~ 34687670 (+) |
| G1169121 | LOC106607257 | other | downstream | 1714895 | 35989856 ~ 35992600 (+) |
| G1169207 | NA | other | downstream | 1892667 | 36167628 ~ 36168331 (+) |
| G1169208 | NA | other | downstream | 1894935 | 36169896 ~ 36171571 (+) |
| LOC110486232 | rprml | other | downstream | 2063132 | 36338066 ~ 36339755 (+) |
