G1167647


Basic Information

Item Value
gene id G1167647
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 34372893 ~ 34373228 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1331531
tattttccaacaggcctatacatttgggtgaggtttttctctcacctgagtagcctcgtttcactgccaaaaataaaatgaaacagtCTACtattcagcgaaataacaacacaatgtcaaatacaggtagcctagtcaaataattaacatccaatcacattaacctttacgctctcgtgggaattccactaactgtccgtatgtagccaaacgtagctgctgctcattccaatTGCTCAAATattgataaatggttaaagaagTAAGGCCCGCATACCTAGACACATACCaactctactggtagtactgctactaccagcagtactacacctgcac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1331531 True 336 lncRNA 0.40 1 34372893 34373228

Neighbor

gene id symbol gene type direction distance location
LOC110486179 LOC106607495 coding upstream 664 34367297 ~ 34372229 (+)
LOC110486178 LOC106607494 coding upstream 6604 34309454 ~ 34366289 (+)
LOC110486177 LOC106607493 coding upstream 80319 34277236 ~ 34292574 (+)
LOC110486176 LOC106607492 coding upstream 100085 34265384 ~ 34272808 (+)
LOC110485153 LOC106607489 coding upstream 151107 34218845 ~ 34221786 (+)
LOC110486182 LOC106607497 coding downstream 50205 34423433 ~ 34429172 (+)
LOC110486181 LOC106607498 coding downstream 56105 34429333 ~ 34443615 (+)
LOC110486183 LOC106607499 coding downstream 84880 34458108 ~ 34491094 (+)
LOC110486187 LOC106600778 coding downstream 270522 34643750 ~ 34678134 (+)
LOC110486188 LOC107665142 coding downstream 307681 34680909 ~ 34687670 (+)
G1167622 NA non-coding upstream 70782 34301822 ~ 34302111 (+)
G1167609 NA non-coding upstream 97932 34274734 ~ 34274961 (+)
G1167585 NA non-coding upstream 121180 34251452 ~ 34251713 (+)
G1167558 NA non-coding upstream 144104 34228560 ~ 34228789 (+)
G1167648 NA non-coding downstream 96 34373324 ~ 34373867 (+)
G1167652 NA non-coding downstream 4170 34377398 ~ 34377621 (+)
G1167653 NA non-coding downstream 4631 34377859 ~ 34378116 (+)
G1167656 NA non-coding downstream 10786 34384014 ~ 34384310 (+)
G1167662 NA non-coding downstream 17505 34390733 ~ 34391000 (+)
G1166779 NA other upstream 569228 33790640 ~ 33803665 (+)
G1166318 NA other upstream 1123685 33239953 ~ 33249208 (+)
LOC110486146 LOC106607468 other upstream 1142410 33001356 ~ 33230495 (+)
ifn2 ifn2 other upstream 1650431 32714937 ~ 32722676 (+)
LOC110486134 LOC106600876 other upstream 2262160 32001741 ~ 32159164 (+)
G1169121 LOC106607257 other downstream 1616628 35989856 ~ 35992600 (+)
G1169207 NA other downstream 1794400 36167628 ~ 36168331 (+)
G1169208 NA other downstream 1796668 36169896 ~ 36171571 (+)
LOC110486232 rprml other downstream 1964865 36338066 ~ 36339755 (+)

Expression


Co-expression Network