XLOC_030801


Basic Information

Item Value
gene id XLOC_030801
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007116.7
NCBI id CM002889.2
chromosome length 72500376
location 6311493 ~ 6312518 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00061508
ctttcattgtcTGCAACAGAGCGGTGTAAACATTCTGCATTTTCTCTTTCCACAGGGGAATGTTGGACTGGTTTGGAATAAAGAGGCTGTGAAATGATGCCAGACTTGCATATTTTTGTGCAAACAATCTCTTTAATCTCATAAAACTGCCCATCCTGCCCTCATCTGGCCAACATTGGAAGTTCATCTCATGCTGCTACAACTTCACAAGCTCATGCTGCCATCTGATGACCCTGATATTCTCCTGTCTGACCATCATCTTCCTCCCCCTCATCATCAGAAACCGTCTGCCGTGTCTCTCTGTGTCTCCACATGTCCCTCCTGTGCAGCTCCAGCATCCTCGGGTTTAATTAAATGGCCAGgcacgtgcacgcacacacatacacactcacgcTCAAGTGCTGCTGATGATATACccagccttaaagggatagtccacctAACATTTTGATCCCTAGTGGTGTAACGGTATATGCACTCAAACAAATGACGTTTGCTGATTGCTCTAACTACTGATATTAAATATGCTGTGTACAGTGTGTATTCGTCCCGAACCGTCACAGTAACGGGTGTCATGGTTCGGTTCATGCACTCTGATGATGAATACGGTCAATCCAGATGCACTTACCACTGGAGATAGGCTGAAAAGACCACAGCAGTGCGAAAACATAACAGTTGTGTCTGAAAATGTGACATTATTTCTTTTGTACCTTTACATCACAAGATGTTTTCAGTTCTGTAGCTGATTGTGACAAaacactagggctgggcgatattggaAAAACAAACTatcaaaatatcatgttttatatcattcgatattgataattattgaatattttttaacaatgcatttaggattattaggatttttttattttttatttaagcactttattttaatttacc

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko02024 Quorum sensing
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00061508 True 909 lncRNA 0.41 2 6311493 6312518

Neighbor

gene id symbol gene type direction distance location
XLOC_030800 NA coding downstream 113168 6198080 ~ 6198325 (-)
XLOC_030799 NA coding downstream 260768 6042066 ~ 6050725 (-)
XLOC_030798 TNC coding downstream 480456 5708576 ~ 5831037 (-)
XLOC_030797 CABZ01075628.1 coding downstream 641614 5666864 ~ 5669879 (-)
XLOC_030796 rabl6a coding downstream 655654 5614620 ~ 5655839 (-)
XLOC_030802 zgc:73226 coding upstream 37810 6350328 ~ 6377865 (-)
XLOC_030803 CABZ01037298.1 coding upstream 88909 6401427 ~ 6433577 (-)
XLOC_030804 NA coding upstream 158507 6471025 ~ 6472754 (-)
XLOC_030805 crybb3 coding upstream 176742 6489260 ~ 6508250 (-)
XLOC_030806 NA coding upstream 198796 6511314 ~ 6511839 (-)
XLOC_030795 NA non-coding downstream 807068 5499803 ~ 5504425 (-)
XLOC_030793 NA non-coding downstream 1009745 5298861 ~ 5301748 (-)
XLOC_030791 NA non-coding downstream 1153320 5156399 ~ 5158173 (-)
XLOC_030808 CABZ01074478.1 non-coding upstream 218549 6531067 ~ 6531182 (-)
XLOC_030810 CABZ01041961.1 non-coding upstream 616516 6929034 ~ 6929148 (-)
XLOC_030811 CABZ01087503.1 non-coding upstream 835773 7148291 ~ 7148407 (-)

Expression


Co-expression Network