G1183875


Basic Information

Item Value
gene id G1183875
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 49882821 ~ 49883435 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1350149
agctttaaacatcccaaggagcactgtgcaagcgataatattgaaatggaaggagtatcagaccactgcaaatctaccaagacctggccgtccctctaaactttcagctcatacaaggagaagactgatcagagatgcagccaagaggcccatgatcactctggatgaactgcagagatctacagctgaggtgggagactctgtccataggacaacaatcagtcgtatattgcacaaatctggcctttatggaagagtggcaagaagaatgccatttcttaaagatatccataaaaagtgttgtttaaagtttgccacaagccacctgggagacacaccaaacatgtggaagaaggtgctctggtcagatgaaaccaaaattgaactttttggcaacaatgcaaaacgttatgtttggcgtaaaagcaacacagctgaacacaccatccccactgtcaaacatggtggtggcagcatcatggtttgggcctgcttttcttcagcagggacagggaagatggttaaaattgatgggaagatggatggagccaaatacaggaccattctggaagaaaacctgatggagtctgcaaaagacctgagactgggacggag

Function

NR:

description
Tc1-like transporase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1350149 True 615 TUCP 0.45 1 49882821 49883435

Neighbor

gene id symbol gene type direction distance location
LOC118938084 NA coding upstream 82982 49799387 ~ 49799839 (+)
LOC110486697 spop coding upstream 169207 49607479 ~ 49713614 (+)
ndua4 ndua4 coding upstream 298268 49580324 ~ 49584562 (+)
LOC110486696 LOC106601597 coding upstream 305552 49571508 ~ 49577269 (+)
LOC110486695 LOC106601598 coding upstream 314996 49558788 ~ 49567825 (+)
LOC110486702 mien1 coding downstream 185457 50068892 ~ 50125626 (+)
LOC110486703 NA coding downstream 190170 50073605 ~ 50076256 (+)
LOC100136769 LOC100136769 coding downstream 195846 50079281 ~ 50090662 (+)
LOC110486704 ubtf coding downstream 207902 50091337 ~ 50113963 (+)
LOC110486708 LOC106606819 coding downstream 230933 50114368 ~ 50123426 (+)
G1183874 NA non-coding upstream 153 49882349 ~ 49882668 (+)
G1183822 NA non-coding upstream 44310 49838235 ~ 49838511 (+)
G1183820 LOC106601594 non-coding upstream 46421 49835104 ~ 49836400 (+)
G1183800 NA non-coding upstream 72661 49809951 ~ 49810160 (+)
G1183794 NA non-coding upstream 77822 49804776 ~ 49804999 (+)
G1183880 NA non-coding downstream 3828 49887263 ~ 49887488 (+)
G1183887 NA non-coding downstream 10650 49894085 ~ 49894301 (+)
G1183888 NA non-coding downstream 11586 49895021 ~ 49895970 (+)
G1183896 NA non-coding downstream 30080 49913515 ~ 49915651 (+)
G1183901 NA non-coding downstream 37710 49921145 ~ 49921527 (+)
G1183819 NA other upstream 47807 49832221 ~ 49835014 (+)
G1182742 NA other upstream 456598 49419570 ~ 49426223 (+)
LOC110486677 LOC106601591 other upstream 599318 49281106 ~ 49284116 (+)
LOC110486678 NA other upstream 616050 49263529 ~ 49266771 (+)
G1184435 LOC106606845 other downstream 1102378 50985813 ~ 50986566 (+)
LOC110487554 LOC106601638 other downstream 1500737 51384172 ~ 51394113 (+)
G1185436 NA other downstream 1562472 51445907 ~ 51446557 (+)
G1185521 NA other downstream 1744247 51627682 ~ 51628676 (+)
G1185527 NA other downstream 1768178 51651613 ~ 51653770 (+)

Expression


Co-expression Network