G1185527


Basic Information

Item Value
gene id G1185527
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 51651613 ~ 51653770 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1351986
GGAAGATCAATTCTAGATATGACAGCTCTAGCAGTACCGTGATTCTACAAGTGAAAAACTTCCAGACTGAAGACACAGCTGTGGATTATTGTGTTCGGTGGACAAATACAACCTTCTGAGTCCtggagagtagagaagagcagctCCCACCAGTTCAGCTTCAACACAAACCATGTACCCTGCATCTCTGTTGCTGCTGCTGGCAGCTGCCTCCTGTGTCCATGGTCAGATCGTACTCACACAGGCTGAGTCAGTCCAGGGGACTCCTGCAGGATCCCTCAAACTCACATGTGCCTGTAGTGGATTCACTCTAAGCAGCACTAATATGTTTTGGATCCGCCAGGCACCTGGAAAAGGACTTGAATGGATcatttactattattctgacagtgACAAGAGCAATGCCCCTGTAGTACAGGGTCGATTCACTGCATCAAAGGACAGCAGTAATTTCTATCTCCACATGAGCCAGTTGAAGCCAGAGGACTCTGCAGTGTATTACTGTGCTAGAGACTCACTATGGTTAAACTAATGAGAATAGCTGTACAAAAACCATCTGGTAGAGAAAggaaggacagacacacagacacacagacacatgtatgGTATGACCAGTAGACCATGACAAGGGGAAACATGAGGAACAATTCTAATGATGTATTAAATAATAACACAATGATACACCTGTTAAATACATGGTGCTAGTGTTGTTGATGCACCAACAGgggcccctctctctccatatgaaTAAAATAAAGACCAGTACTGATGAAGGCCCTTGTTATGGGATTTACGAATAATAACTAAATGAGGTATACGTCACTATAACTGGCAACTATTCTACCCTGTCTTTCTTGTAGTGTTAAATAATGTGTGTTCATTAGGAAGGGGTTATATGGCATGTACCGaggaagaaaggaatgtatgtggggtgttacggatacaggtatcctgtgggtgtgtgtgtgtatgtatcctgtgttcttttctctccttctcccctcacaggtgaaaatcatcactccacaatcaatcatcaatcagaagacacacctcctcctgttttctACCcaatcacacttcctctcccttggtttaaaaaccctgtcagttgtttgctctagagctcaatctctctgtaaatacTATATCTCTGTAGATCGCGCTGTTTCACCCTCTACTACTATGTCTCTCTATCGCTCTTTATGTATTGAGCTCTCTGAGCACCTCCATATC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1351986 True 1236 TUCP 0.44 3 51651613 51653770

Neighbor

gene id symbol gene type direction distance location
LOC110486751 LOC106606781 coding upstream 61117 51586246 ~ 51590496 (+)
LOC110486745 LOC106601712 coding upstream 85282 51562364 ~ 51566331 (+)
LOC110486737 LOC106606772 coding upstream 247033 51394436 ~ 51404580 (+)
LOC110487554 LOC106601638 coding upstream 257500 51384172 ~ 51394113 (+)
LOC110486735 LOC100380774 coding upstream 277622 51344378 ~ 51373991 (+)
LOC118938087 NA coding downstream 109811 51760793 ~ 51765924 (+)
LOC118938318 LOC106606767 coding downstream 130118 51783888 ~ 51823957 (+)
LOC118938088 NA coding downstream 186682 51840452 ~ 51852886 (+)
LOC110486748 NA coding downstream 282272 51779397 ~ 51941040 (+)
LOC110486763 NA coding downstream 298346 51952116 ~ 51954859 (+)
G1185564 carm1 non-coding upstream 74858 51574021 ~ 51576755 (+)
G1185534 LOC106606779 non-coding upstream 90246 51559721 ~ 51561367 (+)
G1185510 NA non-coding upstream 97677 51553700 ~ 51553936 (+)
G1185509 NA non-coding upstream 98295 51553108 ~ 51553318 (+)
G1185507 NA non-coding upstream 100388 51550964 ~ 51551225 (+)
G1185623 NA non-coding downstream 78191 51731961 ~ 51736516 (+)
G1185538 NA non-coding downstream 208823 51862593 ~ 51864290 (+)
G1185714 NA non-coding downstream 271319 51925089 ~ 51930454 (+)
G1185722 NA non-coding downstream 302400 51956170 ~ 52023060 (+)
G1185521 NA other upstream 22937 51627682 ~ 51628676 (+)
G1185436 NA other upstream 205056 51445907 ~ 51446557 (+)
G1184435 LOC106606845 other upstream 665047 50985813 ~ 50986566 (+)
G1183875 NA other upstream 1768178 49882821 ~ 49883435 (+)
G1185522 NA other downstream 40113 51693883 ~ 51695058 (+)
G1185535 NA other downstream 44106 51697876 ~ 51698646 (+)
G1185616 NA other downstream 63978 51717748 ~ 51718204 (+)
G1185539 NA other downstream 79879 51733649 ~ 51734324 (+)

Expression


Co-expression Network