G1185539


Basic Information

Item Value
gene id G1185539
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 51733649 ~ 51734324 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1351998
CTCTGAGTCCTGGAAAGTAGAGAAGAGCAGCTCACACCTGTTGAACTTCAACACAAACCAtgttctctgcatctctgctgctgctgttggtaGCTGCTTCCTGTGTTCATAGTCAGATATTGACTGAGTCTGGACCAGTAGTTAAAAAGCCTGGAGAATCACACAAACTGACCTGTACAACCTCTGGGTTCACATTCAGTAGCTACTACATGGCTTGGATCAGACAGGCTCCTGGGAAAGGACTGGAGTGGATTGCttctagttatagtactgctacATATTATTCCCAGTCAGTCCAGGGTAGATTTACCATCTCCAGAGATGACTCCAGAAGTAAGCTGTACCTACAGATGAACATTCTGAAGAGTGAGGACACAGCAGTGTATTACTGTGCTAGAGAGTCACAGTGGTTAAATTAAGTGAGAAGCGGCACAAAAACCACTTCCCCATTCAGCACAAACAACCTCATATCTTGTTGATGCATTTTTTAAATGTGTGGTGTGTGGAAGCACAGCTTATAAAGATTCCCTTAAAAACAAGTTCAGCATCACCAGAGACACTTCCAGCAACACATAGTTTTAAAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1351998 True 584 TUCP 0.43 2 51733649 51734324

Neighbor

gene id symbol gene type direction distance location
LOC110486751 LOC106606781 coding upstream 143153 51586246 ~ 51590496 (+)
LOC110486745 LOC106601712 coding upstream 167318 51562364 ~ 51566331 (+)
LOC110486737 LOC106606772 coding upstream 329069 51394436 ~ 51404580 (+)
LOC110487554 LOC106601638 coding upstream 339536 51384172 ~ 51394113 (+)
LOC110486735 LOC100380774 coding upstream 359658 51344378 ~ 51373991 (+)
LOC118938087 NA coding downstream 29257 51760793 ~ 51765924 (+)
LOC118938318 LOC106606767 coding downstream 49564 51783888 ~ 51823957 (+)
LOC118938088 NA coding downstream 106128 51840452 ~ 51852886 (+)
LOC110486748 NA coding downstream 201718 51779397 ~ 51941040 (+)
LOC110486763 NA coding downstream 217792 51952116 ~ 51954859 (+)
G1185578 NA non-coding upstream 12660 51604070 ~ 51720989 (+)
G1185564 carm1 non-coding upstream 156894 51574021 ~ 51576755 (+)
G1185534 LOC106606779 non-coding upstream 172282 51559721 ~ 51561367 (+)
G1185510 NA non-coding upstream 179713 51553700 ~ 51553936 (+)
G1185509 NA non-coding upstream 180331 51553108 ~ 51553318 (+)
G1185538 NA non-coding downstream 128269 51862593 ~ 51864290 (+)
G1185714 NA non-coding downstream 190765 51925089 ~ 51930454 (+)
G1185722 NA non-coding downstream 221846 51956170 ~ 52023060 (+)
G1185726 NA non-coding downstream 236649 51970973 ~ 51975692 (+)
G1185616 NA other upstream 15445 51717748 ~ 51718204 (+)
G1185535 NA other upstream 35003 51697876 ~ 51698646 (+)
G1185522 NA other upstream 38591 51693883 ~ 51695058 (+)
G1185527 NA other upstream 79879 51651613 ~ 51653770 (+)
G1185521 NA other upstream 104973 51627682 ~ 51628676 (+)
G1185530 NA other downstream 96466 51830790 ~ 51847380 (+)
G1185531 NA other downstream 134977 51869301 ~ 51880953 (+)
G1185687 NA other downstream 147064 51881388 ~ 51881976 (+)
G1185525 NA other downstream 164632 51898956 ~ 51899716 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_026566 ighv5-2 coding NC_007114.7 CM002887.2 34101631 ~ 34102075 (-)
striped catfish (Pangasianodon hypophthalmus) LOC117598898 NA misc NC_047607.1 CM018553.1 22214544 ~ 22215344 (-)