LOC110486763


Basic Information

Item Value
gene id LOC110486763
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 51952116 ~ 51954859 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_002468108.2
GGGAGAAGCCGTACAAAAAGCACTTCCCCATTCAGCACAGACAACCTCATTTATTTTTGATCAATGCTTTAATAGCTAAATGTTCACAAGCACCACTATACATTTGTTTTCACAAAATTACTTGATACATATAGTATACAGTAGGATTATCAATAATAAGAAAACAAAGATTAACCATCTTAGAGTTTCATCTCCCAtaagtgtagtgatagaaactgACACATTACCACAGAATGTCCCCCCATTTTGAACTGATGCTCCCAGTCCTTTATACCTGATTATCTTGATTCTGCTAATGtgatctaactctctctctccctgtccctcagcAGCTCACAACAGTTCGACTTCAATACAAACCATGTTCCCTGCATCTCTGCTGCTTCTGGCAGTTGCCTCCTGTGGCTACTGTGTTGTTGAACTTATCCAGTCTGGTCCAGTGGTTAGAAAACCAGGAGAGTCTCAGCATTATATTCTCAATGTCCTCGCTGGATATGACAAGCTGAAGGCAAAGCTTTGGAGTATGTTGGTTATACATGTATTAGTAGTACCTCCACTGTAGACTCACTGAAGATCAAGATCAGTTCTATATACAACAGCTCCAGCAGTACAGCGTTTCTACAAGGGAACAACTTCCAGACTGAAGACACAGCTGTTTATTACTGTGTCTGTGAGACACAGTGATACAAACCACAACCAGAGATGtacaaaaacatattttccagGGATTCATTGTATAACAGGACTAATTAAAATAAATAGAACATAGATGTTTCTCAATATGAAATATGTAAACGAATATAAGCCCATCATTAGCAGAGCTGGGAATGTATATCTGAGTTGTTTGCCAATTATACTCCTGATATGACTTGAAGGTATTCTAATTGATGTCTATCAAACGTTCAATGAACTCATTCATGATTCATTTCTTTAATGTTTTAATCATTCACATGATAAAGTTGTCCAGTACCGGACAAGAAGGTCTAAGTTCTgtggtatcaaaaatatgcaaattaTTATGATATAAATACAGATATATGCAACAATATAAAGACTGCGGACAATTGACACTAATTGGTTATGATACAAAAAATATTGTCAGAGTGTAAAGCTCAATGTATAAGAGTCCTGCCTAACATTATCCTCCAGCATCAGTCTGTTTTTTTCACGGAGAACACATTAGACTATGTATAGCTTGCACAGCTATTACGTATTTTTTCCCCTCCAGATATTCCCATTAATTATATATATCCTCTACTTATGCAAATTCTACCCagcctctcttcctttctctccctctacctcctatATAAAACCTCTCTGTATCTGAGAATCCCTGCACGTCCCTCTGAGTCCtggagagtagagaagagcaaCTCACACCAGTTCAGCTTCAGCACAAATCATGTTCCCTGCATCTCTGCTGCTGATGCTGGCAGCTGCCTCCTgtgTCCACTGTCAGGTCGTACTCACACAGGCTGAACAGTCAGTCCAGGGGAGCCCCGGGGGATCCCTCAAACTCCTGTAGTGTGCCTGTAGTGGATTTACTCTAAGCAGCACTAATATGTACTGGATCCGCCAGGCACCTGGAAAAGGACTTGAATGGATtgtttactattattctgacagtgACAAGAGCAATGCCCAGGTAGTACAGAGTAGATTCACAGCGTTGAAGGACAGCAGTAATTTCTATCTCCACATGAGCCAGTTGAAGCCAGAGGACTCTGCAGTGTATTACTTTGCTAGAGACTCACTATGGTTAAACTAATGAGAATAGTTGTACAAAAACCATCTGGTAGAGAAAGGAAGGACGTGTACAAACACATGACAAGGGGAAACATAAGGAACAATTCTAATGATGTATTAAATAATAACACAATGATACACCTGTTAAATACATGGTGCTAGTGTTGTTGATGCACCAACAGgggcccctctctctccatatgatTAAAATAAAGACCAGTACTGATGAAGGGTGTGCTATTTCATTTTATtacaggaaaaaaatatataatatggaTGGATGTTGATTAAATATACTTTACAGTTTGTCAAGATGAAAGTAAAGTGTCTTAAATATGTTTCATTCACCTTAAGTATTAACTAATACTTGAATGTAGTGTTTCATATCCCCCCTTCACATTCAAAAATATAACCGATAGAGGGTCTCTGGCTTAGGTTGTGTCCAGTTATAGATGTAATGCATCAATACATCAATGCAACCCACAGCCATTCATACATGTTTGTCTCTTTGTATACAGGACACCAAACAATGTGTTacgtcagttgttttaccattgtgttagtcagttgttttcctattg

Function

NR:

description
immunoglobulin mu heavy chain, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_002468108.2 True 2330 mRNA 0.39 3 51952116 51954859

Neighbor

gene id symbol gene type direction distance location
LOC110486748 NA coding upstream 11076 51779397 ~ 51941040 (+)
LOC118938088 NA coding upstream 99230 51840452 ~ 51852886 (+)
LOC118938318 LOC106606767 coding upstream 128159 51783888 ~ 51823957 (+)
LOC118938087 NA coding upstream 187500 51760793 ~ 51765924 (+)
LOC110486751 LOC106606781 coding upstream 361620 51586246 ~ 51590496 (+)
LOC110485215 LOC106606764 coding downstream 93285 52014531 ~ 52091683 (+)
LOC110486764 LOC106606789 coding downstream 166624 52121483 ~ 52139499 (+)
LOC110486765 LOC106606792 coding downstream 186414 52141273 ~ 52142730 (+)
LOC110486767 alkb7 coding downstream 419965 52374824 ~ 52390015 (+)
LOC110485217 fcl coding downstream 451318 52406177 ~ 52414576 (+)
G1185714 NA non-coding upstream 21662 51925089 ~ 51930454 (+)
G1185538 NA non-coding upstream 87826 51862593 ~ 51864290 (+)
G1185623 NA non-coding upstream 215600 51731961 ~ 51736516 (+)
G1185578 NA non-coding upstream 231127 51604070 ~ 51720989 (+)
G1185722 NA non-coding downstream 1311 51956170 ~ 52023060 (+)
G1185726 NA non-coding downstream 16114 51970973 ~ 51975692 (+)
G1185519 NA non-coding downstream 114966 52069825 ~ 52070857 (+)
G1185541 NA non-coding downstream 117381 52072240 ~ 52074041 (+)
G1185774 NA non-coding downstream 138516 52093375 ~ 52093611 (+)
G1185525 NA other upstream 52400 51898956 ~ 51899716 (+)
G1185687 NA other upstream 70140 51881388 ~ 51881976 (+)
G1185531 NA other upstream 71163 51869301 ~ 51880953 (+)
G1185530 NA other upstream 104736 51830790 ~ 51847380 (+)
G1185528 NA other downstream 8564 51963423 ~ 51965490 (+)
G1185815 NA other downstream 220407 52175266 ~ 52176505 (+)
G1185855 NA other downstream 319471 52274330 ~ 52355941 (+)

Expression


Co-expression Network