G1185623


Basic Information

Item Value
gene id G1185623
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 51731961 ~ 51736516 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1352088
aaattattcagcccccttaagttaatactttgtagcgccaccttttgctgcgattacagctgtaagtcgcttggggtatgtctctatcagttttgcacatcgagagactgacattttttcccattcctccttgcaaaacagctcgagctcagtgaggttggatggagagcatttgtcaacagcagttttcagttctttccacagattctcgattggattcaggtctggactttgacttggccattctaacacctggatatgtttatttttgaaccattccattgtagattttgctttatgttttggatcattgtcttgttggaagacaaatctccgtcccagtctcaggtcttttgcagactccatcaggttttcttccagaattgtctgtatttggctccatctatc

Function

NR:

description
Tc1-like transporase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1352088 True 408 lncRNA 0.42 2 51731961 51736516

Neighbor

gene id symbol gene type direction distance location
LOC110486751 LOC106606781 coding upstream 141465 51586246 ~ 51590496 (+)
LOC110486745 LOC106601712 coding upstream 165630 51562364 ~ 51566331 (+)
LOC110486737 LOC106606772 coding upstream 327381 51394436 ~ 51404580 (+)
LOC110487554 LOC106601638 coding upstream 337848 51384172 ~ 51394113 (+)
LOC110486735 LOC100380774 coding upstream 357970 51344378 ~ 51373991 (+)
LOC118938087 NA coding downstream 27065 51760793 ~ 51765924 (+)
LOC118938318 LOC106606767 coding downstream 47372 51783888 ~ 51823957 (+)
LOC118938088 NA coding downstream 103936 51840452 ~ 51852886 (+)
LOC110486748 NA coding downstream 199526 51779397 ~ 51941040 (+)
LOC110486763 NA coding downstream 215600 51952116 ~ 51954859 (+)
G1185578 NA non-coding upstream 10972 51604070 ~ 51720989 (+)
G1185564 carm1 non-coding upstream 155206 51574021 ~ 51576755 (+)
G1185534 LOC106606779 non-coding upstream 170594 51559721 ~ 51561367 (+)
G1185510 NA non-coding upstream 178025 51553700 ~ 51553936 (+)
G1185509 NA non-coding upstream 178643 51553108 ~ 51553318 (+)
G1185538 NA non-coding downstream 126077 51862593 ~ 51864290 (+)
G1185714 NA non-coding downstream 188573 51925089 ~ 51930454 (+)
G1185722 NA non-coding downstream 219654 51956170 ~ 52023060 (+)
G1185726 NA non-coding downstream 234457 51970973 ~ 51975692 (+)
G1185616 NA other upstream 13757 51717748 ~ 51718204 (+)
G1185535 NA other upstream 33315 51697876 ~ 51698646 (+)
G1185522 NA other upstream 36903 51693883 ~ 51695058 (+)
G1185527 NA other upstream 78191 51651613 ~ 51653770 (+)
G1185521 NA other upstream 103285 51627682 ~ 51628676 (+)
G1185530 NA other downstream 94274 51830790 ~ 51847380 (+)
G1185531 NA other downstream 132785 51869301 ~ 51880953 (+)
G1185687 NA other downstream 144872 51881388 ~ 51881976 (+)
G1185525 NA other downstream 162440 51898956 ~ 51899716 (+)

Expression


Co-expression Network