G1185541


Basic Information

Item Value
gene id G1185541
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 52072240 ~ 52074041 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1352000
GAGACAATATTATCTATGACTGATACCGGAGACAGTATTATCTATGACTGATACCGGAGACAGTATTATCTATGACTGATACCGGAGACAGTATTATCTATGACTGATACCGGAGACAGTATTATCTATGACTGATACCGGAGACAGTATTATCTATGATTGATACCGGAGACAGTATTATCTATGACTAATACCAGAGACAGTATTATCTATGACTGATACCGGAGACAGCTGTACTATGCATTGTTTCCCATAAAACAGTTCAAAGTATACCCATTCCAACTGTTTGACACTTATTGATAGCCCATTTAGATCTGCAATGAACAGTAAGGGTAGGCTACATGCAAAACTCCCCCTTGTTAACAATATGGCTGGAGCGATGGCGGAACTAAGATCTATGACAAATACTTTCAGATTTCTTAGGAGCCATCAAGAAGTGTCCAGAAGTTGGGGTTTGTGATTGGGTTTCAGACTGGGCACCAGAGTGATGAGTAACCGTTTTGACTGCCTACTGACACTGTTCTCATATCCACATGCAGATTGTCTCGTGTTGACTGACTGTCCATGCAGCAACACCATGGAAACCGACAGGGACAGCATGGGAAAAACAGCCTTCACCTTCATCATACTCTTCCTCATAACTCTGCTGTATGGCGTTGGAGCAACTGCCATCAAGGTGAAATGAAGAAACTGAGTTTGAAGTACTTGAAGAAGATATTACTTTTCATACTTACAATACAGTATATGAATGGATACAATACATGTAACTGTTCTCCTGCTTGTCTTTATTGTTGATTTTGTTTGAATAGTTCAACTGTAGAGGTTAGATTTGTAAATATTTCATTGTGCCTTTTTAAACTATTAAGATAATAAAGTGTAACTGAAGTGAACAACAGTGTATTGTTCTTCCCTTAGCATTTCTCCATTCATTAAAAAGAACATGCAG

Function

NR:

description
immunoglobulin heavy chain constant region transmembrane domain, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1352000 True 946 lncRNA 0.39 2 52072240 52074041

Neighbor

gene id symbol gene type direction distance location
LOC110486763 NA coding upstream 117381 51952116 ~ 51954859 (+)
LOC110486748 NA coding upstream 131200 51779397 ~ 51941040 (+)
LOC118938088 NA coding upstream 219354 51840452 ~ 51852886 (+)
LOC118938318 LOC106606767 coding upstream 248283 51783888 ~ 51823957 (+)
LOC118938087 NA coding upstream 307624 51760793 ~ 51765924 (+)
LOC110486764 LOC106606789 coding downstream 47442 52121483 ~ 52139499 (+)
LOC110486765 LOC106606792 coding downstream 67232 52141273 ~ 52142730 (+)
LOC110486767 alkb7 coding downstream 300783 52374824 ~ 52390015 (+)
LOC110485217 fcl coding downstream 332136 52406177 ~ 52414576 (+)
LOC118938557 LOC106601687 coding downstream 369948 52443989 ~ 52444998 (+)
G1185519 NA non-coding upstream 1383 52069825 ~ 52070857 (+)
G1185722 NA non-coding upstream 49180 51956170 ~ 52023060 (+)
G1185726 NA non-coding upstream 96548 51970973 ~ 51975692 (+)
G1185714 NA non-coding upstream 141786 51925089 ~ 51930454 (+)
G1185774 NA non-coding downstream 19334 52093375 ~ 52093611 (+)
G1185775 NA non-coding downstream 20660 52094701 ~ 52095145 (+)
G1185782 NA non-coding downstream 28336 52102377 ~ 52102600 (+)
G1185783 NA non-coding downstream 28757 52102798 ~ 52103079 (+)
G1185793 NA non-coding downstream 30756 52104797 ~ 52107657 (+)
LOC110485215 LOC106606764 other upstream 2625 52014531 ~ 52091683 (+)
G1185528 NA other upstream 106750 51963423 ~ 51965490 (+)
G1185525 NA other upstream 172524 51898956 ~ 51899716 (+)
G1185687 NA other upstream 190264 51881388 ~ 51881976 (+)
G1185531 NA other upstream 191287 51869301 ~ 51880953 (+)
G1185815 NA other downstream 101225 52175266 ~ 52176505 (+)
G1185855 NA other downstream 200289 52274330 ~ 52355941 (+)
LOC110539012 LOC106606743 other downstream 930011 52907896 ~ 53046938 (+)

Expression


Co-expression Network