G1188696


Basic Information

Item Value
gene id G1188696
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 55339773 ~ 55340366 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1355762
cacatgcgccgaatacaacaggtgtagactttagagtgaaatgattacttacgaGCCTATACCCGACAATGCAGATTTAAAAAGTAAGAacaatatttgctaaataaaaaagTAGATAGgaacacaataaaaacaataacgagggtatatacaaggagtacctgtaccgagtcaatgtgcaggggtacgaggtagtttaggtaattgaggtaacacAGTATGTACTGGTAGGTAGCTAGTgataaaagtgactaggcaatcaggatatataactgcgtagcagcagtgtgtgtgtgagtgtgcctatgtgtgtgtgtgtatgtcatcattatgcatgtgtgtgagtttatgtagtatgtgtgtgatggagtgtcagtgtagtatgcgCAAGTTTacgtagtatgtgtgtgttggagtgtcagtgtagcaTGTGTGAGTTTACATAATATGTGTGtgctggagtgtcagtgtagtatgtgtgagtttatgtagtatgtgtgtgttggagtgtcagtgtagtatgtgtgagtttatgtagtatgtgtgtgttggagtgtcagtgtagtatgtgtgagtttaTGTAGTATGTGTGTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1355762 True 594 lncRNA 0.40 1 55339773 55340366

Neighbor

gene id symbol gene type direction distance location
pvalb1 pvalb1 coding downstream 15463 55321599 ~ 55324310 (-)
LOC110486849 LOC106601824 coding downstream 23039 55312290 ~ 55316734 (-)
aimp2 aimp2 coding downstream 46342 55289150 ~ 55293431 (-)
LOC110486847 LOC106606650 coding downstream 63102 55254697 ~ 55276671 (-)
LOC110516592 LOC106601772 coding downstream 97623 55209614 ~ 55242150 (-)
LOC110519575 LOC106606659 coding upstream 54498 55394864 ~ 55419061 (-)
LOC110485238 LOC106601829 coding upstream 94770 55434816 ~ 55509918 (-)
LOC110538789 LOC106606674 coding upstream 192881 55533247 ~ 55574537 (-)
LOC110486851 LOC106606669 coding upstream 689055 56029421 ~ 56036822 (-)
LOC110485237 LOC106606659 coding upstream 747926 56088292 ~ 56110984 (-)
G1188693 NA non-coding downstream 12419 55327073 ~ 55327354 (-)
G1188675 NA non-coding downstream 34887 55304637 ~ 55304886 (-)
G1188669 NA non-coding downstream 51559 55284446 ~ 55288214 (-)
G1188638 NA non-coding downstream 85291 55243545 ~ 55254482 (-)
G1188717 NA non-coding upstream 31833 55372199 ~ 55372529 (-)
G1188682 NA non-coding upstream 89368 55429734 ~ 55432178 (-)
G1188744 NA non-coding upstream 176824 55517190 ~ 55517458 (-)
G1188752 NA non-coding upstream 182573 55522939 ~ 55523269 (-)
LOC110486836 LOC106606701 other downstream 313325 55022619 ~ 55026465 (-)
LOC110485228 LOC106606689 other downstream 508451 54813122 ~ 54831352 (-)
LOC110486825 LOC106606691 other downstream 591115 54741479 ~ 54748709 (-)
G1188186 LOC106588841 other downstream 739324 54599401 ~ 54600449 (-)
G1189279 LOC106601786 other upstream 571858 55912224 ~ 55915885 (-)
G1189660 LOC106601786 other upstream 1329927 56670293 ~ 56674238 (-)
LOC110486894 LOC106601810 other upstream 1740451 57054453 ~ 57085521 (-)

Expression


Co-expression Network