XLOC_031765 (CU638693.2)



Basic Information


Item Value
gene id XLOC_031765
gene name CU638693.2
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 2227632 ~ 2232544 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00062231
GTCTAAAAGCATCTGTTTATGGCTTCCACCATCCGCTCAGACTAATTTACAGTGTTCAAATGTGGCACATCCTCCAGAGGAGactaaaaacaaagcagctaTAGAGAGTGATGATGATGCTAATATTCATCACACATGCATCCAGACTCCAGCTTGTCAGATTCCCTTTTGTGTTGATATTAATTCACCTCCGTCAGATATCCAGTTTCTCCAGCCGGCTCTATCCGCCGAGGGTCTTTCCGGAGGGCCCTTTAGGTATTTCCTGGGAGCCCGGGAGCTGCTGGAGGAACGGCTGATGCTGGATTTGTTGGAAGATCtggatttctttcttctgctgctTCTGAAAGCACAGGGTGAAGATCCAGTCTGTGCACTAAGACAGACAGCAGCTCGGCGGATCACAGAGACGTACCTGAAGGAAAACAAGCCACGCTTTATTAGACATCTGGATGCAGAGATTAGACAAAATCTGTCCTCGCTTCTGCCCTCCAGTGCAGCTCTGCCGTGGATTTACAAGGCCAAATATCACTTATGCAAGGAGCTCCGGGAGGTTTATAACTCATTTTTAGATGCAGATGATGAAGCTCTGCTGTCTCTGCTGAGTTCAGACGGCAATGGGCTTGAAGACTCTGTGCCGCTGCTGTTTTCTAGTTTCGGGACTGAAACAGATGC

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000096924

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00062231 True 672 lncRNA 0.48 3 2227632 2232544

Neighbor


gene id symbol gene type direction distance location
XLOC_031764 CU638693.3 coding upstream 289 2222764 ~ 2227343 (+)
XLOC_031763 acvr1bb coding upstream 28949 2174082 ~ 2198683 (+)
XLOC_031762 tgm2b coding upstream 105146 2093206 ~ 2122486 (+)
XLOC_031761 quo coding upstream 134973 2030703 ~ 2092659 (+)
XLOC_031760 NA coding upstream 396153 1825214 ~ 1831479 (+)
XLOC_031766 CU638693.1 coding downstream 3349 2235893 ~ 2242684 (+)
XLOC_031767 pbx1b coding downstream 39015 2271559 ~ 2395013 (+)
XLOC_031768 CABZ01056637.1 coding downstream 224911 2457455 ~ 2464048 (+)
XLOC_031769 LO017858.1 coding downstream 259189 2491733 ~ 2506452 (+)
XLOC_031770 LO018168.1 coding downstream 287429 2519973 ~ 2593500 (+)
XLOC_031759 NA non-coding upstream 418740 1800143 ~ 1808892 (+)
XLOC_031758 NA non-coding upstream 439588 1787674 ~ 1788044 (+)
XLOC_031755 NA non-coding upstream 692169 1528725 ~ 1535463 (+)
XLOC_031771 NA non-coding downstream 384845 2617389 ~ 2620338 (+)
XLOC_031773 BX255959.1 non-coding downstream 933064 3165608 ~ 3165722 (+)

Expression



Co-expression Network