LOC110491706 (ramp2)


Basic Information

Item Value
gene id LOC110491706
gene name ramp2
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 24847067 ~ 24850602 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021565349.2
TGGGCAAACTTTTTGGGCAAACTTCTTGGTGTAGGTTGAAGTGGCCCCTATACGCTGGTCTTGGGTCAGCTTTGCATTTCCCCTgctaatggttaaggttgggaTTGAGGAAGGGGAAGCTTATCAtggatctgtacctaggggaaatgCCACCCCAAAGTCGGTGTCCATCGAGCCATGAAATCAACATCAACAGAACAGTAGGATGTTTCGTCAGCACTTTTCTGTGAACAATGGCTGGAAAAACATGGGTGGGCTTAGGTCTCGCTCTTTAACCCACTCCTGTTCACTTTCGGAGGAGGACAACGTATTGACACTCTTGGCTGCTACTCACTGGTCCTTGAGTTTAATTTGGCTCCGGGGCTCTCCAGTGTCCTCTCTCCACCATGATCTTCCTACTGCTTTTCCCTGTCCTCGTCTTAGGTCAAATTCAATTACAAAGCAACGTCTCATCCAATGTAACATTTGAAGATAACGAAAGTTTTCAGGATCAGGAGTATTCCGCTGTTTTTCGCCACTGCAATGAGAACCTCCTAGAACACTTCAGCTACACTATCTGCTGGAATCCGTTTCACTCTGAAATGACAGACATCAACAAGGAACTCTGGTGTGAATGGGACCAAGTCATCAGACCATACAATGAGCTGACCAGATGTATCGAGAGCTTGACCACCAACTTAGGATGTTACTTCCCGAACCAAGTGGTGCAAGACTTCTTTATCCAGATCCATTCCAGCTTCTTCCAGGCATGTCCGGAGGAGGAGCAGTTATTTCCCGATGCCCCCTCCGGTGTTGTGCTTACCCTTACCCTCATTCCAGTCAGTCTCATCCCCGTCTTGGTTTTCCTAGTGGTCTGGAAGAGCAAGATCTGCGACTAAGTTGGAAATGTTGAATATGTGCTGTTTGAATGTGTCTTAGGTCCCTTCCTGAAACAACCCCTATCAAAAATGTCCTCTAAGTATTTTCTTATAATGTGTTTATTTTTAAAATATGATTATTGTATGTATATTAAGATTGCTTCTATTTGTATATTTGTAatgttgcaaaatacatttacttatttctttcacaaaaaaaaatcttaTAATTGTATCTATTCTGAAACAACCCCATGtcaatatatttatattgtaATACAGTATAAGGGCAGTATAAGtgaataatataacatactgtgcTCAGCCAACCAAACCTGCTATTGGTCTGTTGGAGTGTTCATTGTGTGCTGCTAAATATCTCTGTTGGAGCACTGCCTAACACTGGGAATCAATGAAGTGCATCCAACTCATTCATGTCATACAGCCAGTTGTTGAAACCCAAGATCTTTAGGCACCAGTCCTGGATCGGGACTTCTAGTGCTGTGGTACCTGCACAAACTAGCCTTTCATTACACTATAATTTAGTGCAATAGCAAATGTACCTTTACTTTCAATGCTAAGACTACCATTGTATGATGTTTCCTGTGCTGGTGTGGTTGTGAAGAGGCGCGTATATCAAGTAACTTGAGTTACAGAGAGGGGTAACTTATTATTTGAATAATCAAGAAGCAGGTTCTCACCGTTTTTCTGAATGAATACAGTGGCTCACCATGGGCCAATCCAGTTGCATtgtcgagagagagaaagatgaagtGGTTGTTTAAATAACGATAGCCTTGTTAACTTTCACATACTTATTAGTTCAGTGGGGAAATACGGACTGCTTGGAACAGGGCAAATTTCTTTTGGTGATTAAACCTTAGAGAAAGA

Function

symbol description
ramp2 Predicted to enable coreceptor activity. Predicted to be involved in several processes, including angiogenesis; protein localization to plasma membrane; and receptor internalization. Predicted to act upstream of or within intracellular protein transport and regulation of G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be part of receptor complex. Predicted to be active in cell surface. Human ortholog(s) of this gene implicated in hypertension. Orthologous to human RAMP2 (receptor activity modifying protein 2).

NR:

description
receptor activity-modifying protein 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021565349.2 True 1748 mRNA 0.42 4 24847067 24850602

Neighbor

gene id symbol gene type direction distance location
LOC110491704 LOC106579127 coding downstream 27435 24816787 ~ 24819632 (-)
LOC110491703 c1ql1 coding downstream 45375 24793546 ~ 24801692 (-)
LOC110491700 LOC106579130 coding downstream 121117 24704857 ~ 24725950 (-)
LOC110491696 crp coding downstream 233947 24611547 ~ 24613120 (-)
LOC110491691 ptrf coding downstream 294564 24528979 ~ 24552503 (-)
LOC110491708 LOC106561205 coding upstream 34546 24884866 ~ 24889077 (-)
cd79b cd79b coding upstream 41467 24892069 ~ 24897710 (-)
scn4aa scn4a coding upstream 63556 24914158 ~ 24960389 (-)
ghrhr2 LOC106579361 coding upstream 174955 25025557 ~ 25033991 (-)
kansl1a LOC106579123 coding upstream 245884 25096486 ~ 25156255 (-)
G1355834 NA non-coding downstream 2352 24839435 ~ 24844715 (-)
G1355847 NA non-coding downstream 87926 24757002 ~ 24759141 (-)
G1355794 NA non-coding downstream 163136 24683112 ~ 24683931 (-)
G1355783 NA non-coding downstream 177285 24669401 ~ 24669782 (-)
G1355782 NA non-coding downstream 177774 24668969 ~ 24669293 (-)
G1355907 NA non-coding upstream 13359 24863961 ~ 24864304 (-)
G1355908 NA non-coding upstream 14319 24864921 ~ 24870292 (-)
G1355913 NA non-coding upstream 22365 24872967 ~ 24873229 (-)
G1355919 NA non-coding upstream 33008 24883610 ~ 24883936 (-)
G1355922 NA non-coding upstream 48095 24898697 ~ 24898900 (-)
LOC110492858 LOC106579369 other downstream 812657 23995179 ~ 24034410 (-)
G1354433 LOC106581475 other downstream 1388520 23451825 ~ 23458547 (-)
G1354351 NA other downstream 1527675 23318569 ~ 23319392 (-)
G1353762 NA other downstream 1802306 23043249 ~ 23044761 (-)
G1353300 NA other downstream 2204965 22641414 ~ 22642102 (-)
G1357833 NA other upstream 1876693 26727295 ~ 26727828 (-)
LOC110491745 LOC106609103 other upstream 1878702 26729304 ~ 26744821 (-)
G1359119 NA other upstream 2261181 27111783 ~ 27113401 (-)
G1359321 NA other upstream 2506682 27357284 ~ 27359562 (-)

Expression


Co-expression Network