XLOC_032649 (BX548046.2)


Basic Information

Item Value
gene id XLOC_032649
gene name BX548046.2
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 11077114 ~ 11077609 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00063583
ctgataaCTACTATATAGTAAGTATTATGTAGTGTACTGCCATGATggcaaaaataaatcagttattagaatttagttaataaaactattgtttagaaatagaaatcttctctccgttaaaaagaaattgggtaaaaattgggtaataattctgacttcaactctatctGCTCATCATAACATTCTCATGCTGATTGTGCTGTTTAGTTTCTGTTCATACTTTGTGGTTGATCATAATGTCATTGTATAAAGAAGAACGAAACGTTGGCTCGTCACAATGAAACCTGAACTATTCTTTGTGGATTGACCTCACTCTCATGTGAAGTCATATGAACATCATTCTGCTGGGTTTGAAACAGAGTGAAGGATTACTCTTTAGTCTGTGActgttttctttatttctatagctgaACACACATTTTAAGAAGCTTCATGAATGGCTGTTCATGCAGtgtattggtttattttttattttgaataaatataattaaaagtc

Function

GO:

id name namespace
GO:0015349 thyroid hormone transmembrane transporter activity molecular_function

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000096270

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00063583 True 496 lncRNA 0.31 1 11077114 11077609

Neighbor

gene id symbol gene type direction distance location
XLOC_032648 sumo3a coding downstream 3234 11070261 ~ 11073880 (-)
XLOC_032647 BX548046.4 coding downstream 36872 11040128 ~ 11040242 (-)
XLOC_032646 coq7 coding downstream 88373 10982786 ~ 10988741 (-)
XLOC_032645 notum2 coding downstream 113031 10943188 ~ 10964083 (-)
XLOC_032644 ccr7 coding downstream 149348 10923105 ~ 10927766 (-)
XLOC_032650 pttg1ipa coding upstream 1084 11078693 ~ 11091449 (-)
XLOC_032651 myo10l1 coding upstream 24142 11101751 ~ 11227225 (-)
XLOC_032652 BX539326.1 coding upstream 124400 11202009 ~ 11202126 (-)
XLOC_032653 NA coding upstream 170896 11248505 ~ 11249854 (-)
XLOC_032654 pcnt coding upstream 194677 11272286 ~ 11362871 (-)
XLOC_032632 NA non-coding downstream 655256 10401624 ~ 10421858 (-)
XLOC_032628 NA non-coding downstream 986128 10076935 ~ 10090986 (-)
XLOC_032623 CU570787.1 non-coding downstream 1195957 9873911 ~ 9881157 (-)
XLOC_032620 NA non-coding downstream 1403992 9673032 ~ 9673122 (-)
XLOC_032655 NA non-coding upstream 339644 11417253 ~ 11418464 (-)
XLOC_032658 NA non-coding upstream 644822 11722431 ~ 11759868 (-)
XLOC_032660 NA non-coding upstream 737560 11815169 ~ 11848486 (-)

Expression


Co-expression Network