XLOC_032650 (pttg1ipa)


Basic Information

Item Value
gene id XLOC_032650
gene name pttg1ipa
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 11078693 ~ 11091449 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00063584
TCTGCAAGTTGAAAGGGAAGCAAAACTACCAAACCTGCTCACAGTTTCAGGCTCGACTGAGGGAGATATTTtctgttaatattaataacaacttaACCGTAAAAAGTCTGTTTTATTTAGCGATTCGCTCATTTAAAGAAGAGAAAATGAATTTTGTGGCTCCGGTCTTCCTGCTTCtcgttgttttgtgtttaacgcTGGCACAGAATACAACACTTTCTCCAAATACTACAACACAAACTTCACCACAGACTTTGACTACGTCTCCAGGACAGTCTTCAGCCACAACAGGAACACAATCTTCAACTACTACAACACAATCTTCAACTACGACAACGCAGACTACTACTCAGTCTACAACTATACCAACAACACCACATCCAAGCTGTGAGAGCAAGAATGGCACCAGCTGTGAGGAGTGCTTGGCCTATGTGGATtgtctATGGTGTCGGACAACTAAGCGTTGCATTACATACCCAGCCAAAAACATCCTGCCTCCCCATTCCCTCTGTCCACTGAATGATGCTCGATGGGGTCTTTGCTCaaTGAATTTCCAGATATTGATCATTACGTTGTCGGTGGCTGCAGCTCTACTCATCATTGGGTTTTTGATTTGCATATTCTGTTGCTGCAAGTGTGAGAACATTGGATCTTCTCGAAATGAAAATAGACTTAATCGACGGGTCGACAAGACGAAAACGAAACAAGAGCAGAGGAAAGCAGAGATGAAAATTAGGCACGATGAGATCCGTCAAAAATATGgtcTCAGCAGGGCAAGTCCTTACGCCAGATTCGACAACCCCAACTAAAATATACTGGGTGCTTTATTTTATggccaaatatatttttattatccgCTGCCTAGGATAACAGTCCACAAAAATGAGCTCAAGGGATTATTTTACCGAAGAATTCAttttaaatggacagttcacctgaaaatgaaaatgacctcaccATTGAGTCTCCATCATGGGGTTTTAAACCTTTGatgttttttctgttgaacacaaaagaagatattttgagaaatgctggttgctgggacccaccaacttccatagtaggggaAAAAGTTACTATGGAAGCCAGTAGCTGTGTATCATTTCAGAGGCAGCACCCTTAAGGAAGGATGCAAACTTCAAAGGTGAGTCCTTTGAAGTCCACACTGGCCGAAACGAGCATTTTGAAATGAGACCATCTAGCCTATACAGAGGACAGATCTCG

Function

symbol description
pttg1ipa Predicted to be involved in protein import into nucleus. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in cytoplasm and nucleus. Orthologous to human PTTG1IP (PTTG1 interacting protein).

GO:

id name namespace
GO:0006606 protein import into nucleus biological_process
GO:0005634 nucleus cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0005737 cytoplasm cellular_component

KEGG: NA

ZFIN:

id description
ZDB-GENE-030131-505 Predicted to be involved in protein import into nucleus. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in cytoplasm and nucleus. Orthologous to human PTTG1IP (PTTG1 interacting protein).

Ensembl:

ensembl_id ENSDARG00000090156

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00063584 True 1227 mRNA 0.42 7 11078693 11091449

Neighbor

gene id symbol gene type direction distance location
XLOC_032649 BX548046.2 coding downstream 1084 11077114 ~ 11077609 (-)
XLOC_032648 sumo3a coding downstream 4813 11070261 ~ 11073880 (-)
XLOC_032647 BX548046.4 coding downstream 38451 11040128 ~ 11040242 (-)
XLOC_032646 coq7 coding downstream 89952 10982786 ~ 10988741 (-)
XLOC_032645 notum2 coding downstream 114610 10943188 ~ 10964083 (-)
XLOC_032651 myo10l1 coding upstream 10302 11101751 ~ 11227225 (-)
XLOC_032652 BX539326.1 coding upstream 110560 11202009 ~ 11202126 (-)
XLOC_032653 NA coding upstream 157056 11248505 ~ 11249854 (-)
XLOC_032654 pcnt coding upstream 180837 11272286 ~ 11362871 (-)
XLOC_032655 NA coding upstream 325804 11417253 ~ 11418464 (-)
XLOC_032632 NA non-coding downstream 656835 10401624 ~ 10421858 (-)
XLOC_032628 NA non-coding downstream 987707 10076935 ~ 10090986 (-)
XLOC_032623 CU570787.1 non-coding downstream 1197536 9873911 ~ 9881157 (-)
XLOC_032658 NA non-coding upstream 630982 11722431 ~ 11759868 (-)
XLOC_032660 NA non-coding upstream 723720 11815169 ~ 11848486 (-)

Expression


Co-expression Network