G1360600



Basic Information


Item Value
gene id G1360600
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 28859091 ~ 28859391 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1555047
agctttgcactcttcgcattctctcaaccagtttcatgaggtagtcacatggaatgcatttcaattaacaggtgtgccttaagttaatttgtggaattccttcccttagggctagggggcagcattcggaagtttggatgactgacgtgccgaaagtaaactgcctgttactcaggcccagaagctaggatatgcatataattggtagtatttGATAGACaatttgaagtttctaaaactgttaaaataatgtttgagtataacagaactgatatggcaggtgaaaacccgaGAAAAATCC

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1555047 True 301 lncRNA 0.40 1 28859091 28859391

Neighbor


gene id symbol gene type direction distance location
afap1l2 afap1l2 coding downstream 92089 28626132 ~ 28767002 (-)
LOC110491790 LOC100194624 coding downstream 318446 28535317 ~ 28540645 (-)
LOC110491788 LOC106579408 coding downstream 324914 28478779 ~ 28534177 (-)
si:ch211-180a12.2 LOC106579407 coding downstream 412420 28388779 ~ 28446671 (-)
eif3c LOC100286610 coding downstream 489747 28298253 ~ 28369344 (-)
LOC110491794 NA coding upstream 553079 29412470 ~ 29423653 (-)
LOC110491798 LOC106578369 coding upstream 815426 29674817 ~ 29702593 (-)
LOC110492894 NA coding upstream 995786 29855177 ~ 29873630 (-)
LOC110492868 LOC106579432 coding upstream 1096215 29955527 ~ 30543872 (-)
LOC110491806 LOC106579428 coding upstream 2065214 30924605 ~ 31019315 (-)
G1360599 LOC106579413 non-coding downstream 1716 28855595 ~ 28857375 (-)
G1360594 NA non-coding downstream 12076 28846798 ~ 28847015 (-)
G1360593 NA non-coding downstream 13054 28845804 ~ 28846037 (-)
G1360214 NA non-coding downstream 28309 28830559 ~ 28830782 (-)
G1360206 NA non-coding downstream 31955 28826897 ~ 28827136 (-)
G1360602 NA non-coding upstream 426 28859817 ~ 28860394 (-)
G1360601 NA non-coding upstream 5355 28864746 ~ 28865433 (-)
G1360609 NA non-coding upstream 19606 28878997 ~ 28879255 (-)
G1360619 NA non-coding upstream 32858 28892249 ~ 28973289 (-)
G1360789 NA non-coding upstream 299642 29159033 ~ 29169741 (-)
taok2b LOC106579406 other downstream 678151 28177715 ~ 28237354 (-)
G1359763 NA other downstream 694864 28163463 ~ 28164227 (-)
G1359412 NA other downstream 1330954 27527163 ~ 27528137 (-)
G1359321 NA other downstream 1499529 27357284 ~ 27359562 (-)
G1359119 NA other downstream 1745690 27111783 ~ 27113401 (-)
G1361290 NA other upstream 637722 29497113 ~ 29497555 (-)
G1361619 NA other upstream 1064480 29923871 ~ 29925154 (-)
G1363836 NA other upstream 2780046 31639437 ~ 31650697 (-)
G1364105 NA other upstream 3026358 31885749 ~ 31886112 (-)
G1364348 NA other upstream 3159403 32018794 ~ 32019498 (-)

Expression



Co-expression Network