Gene
RNA
| Item | Value |
|---|---|
| gene id | G1379579 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 46146259 ~ 46146486 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1575896 | True | 228 | lncRNA | 0.58 | 1 | 46146259 | 46146486 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| cebpb | LOC100136165 | coding | upstream | 7608 | 46137034 ~ 46138651 (+) |
| LOC118939543 | NA | coding | upstream | 44248 | 46095078 ~ 46102011 (+) |
| LOC110491071 | NA | coding | upstream | 144870 | 46000033 ~ 46001389 (+) |
| LOC110492122 | LOC106567192 | coding | upstream | 203706 | 45932660 ~ 45942553 (+) |
| LOC110492123 | pym1b | coding | upstream | 214041 | 45922265 ~ 45932218 (+) |
| LOC110492135 | LOC106567202 | coding | downstream | 21997 | 46168483 ~ 46185390 (+) |
| tuba5 | LOC106572477 | coding | downstream | 39435 | 46185921 ~ 46193971 (+) |
| kdm5bb | LOC106567205 | coding | downstream | 47616 | 46194102 ~ 46230145 (+) |
| LOC110492736 | LOC106567342 | coding | downstream | 85147 | 46231633 ~ 46242266 (+) |
| LOC110492737 | LOC106567206 | coding | downstream | 97430 | 46243916 ~ 46256237 (+) |
| G1379578 | LOC100194703 | non-coding | upstream | 2267 | 46143771 ~ 46143992 (+) |
| G1379577 | NA | non-coding | upstream | 2928 | 46142885 ~ 46143331 (+) |
| G1379501 | NA | non-coding | upstream | 6279 | 46139723 ~ 46139980 (+) |
| G1379557 | LOC105022328 | non-coding | upstream | 25670 | 46114915 ~ 46120589 (+) |
| G1379563 | NA | non-coding | upstream | 47899 | 46098073 ~ 46098360 (+) |
| G1379618 | NA | non-coding | downstream | 96843 | 46243329 ~ 46243595 (+) |
| LOC110492739 | LOC106572469 | non-coding | downstream | 121358 | 46267809 ~ 46278481 (+) |
| G1379630 | NA | non-coding | downstream | 129752 | 46276238 ~ 46276499 (+) |
| G1379631 | LOC106567210 | non-coding | downstream | 136761 | 46283247 ~ 46283990 (+) |
| G1379272 | NA | other | upstream | 438810 | 45705739 ~ 45707449 (+) |
| G1377698 | NA | other | upstream | 1965084 | 44144188 ~ 44181175 (+) |
| ubxn10 | ubxn10 | other | upstream | 2404753 | 43740654 ~ 43742224 (+) |
| G1376652 | NA | other | upstream | 3052499 | 43093501 ~ 43093760 (+) |
| pfd4 | pfd4 | other | upstream | 3134321 | 43009496 ~ 43011939 (+) |
| G1379941 | NA | other | downstream | 674009 | 46820495 ~ 46865266 (+) |
| G1379959 | LOC106567238 | other | downstream | 798771 | 46945257 ~ 46948217 (+) |
| LOC110491080 | LOC106572377 | other | downstream | 879636 | 47026122 ~ 47029192 (+) |
| LOC110492164 | mitf | other | downstream | 2135724 | 48282132 ~ 48331926 (+) |
