LOC118940337


Basic Information

Item Value
gene id LOC118940337
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 16511861 ~ 16519036 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036949151.1
CACAGAACTCACACTCTTCTGTTTCACACAGCCAGTATAAGGTCTCCTACCAAACTCCTCTCTTCACTCTGGAGGGTGATGCAACAATGGCCTTGAGAACAGCAGGAAGTGTGTTGGTGCTCCTTCTCTTGTCCGTGGCAGCAACTACGGCAACACAGCGTGGACAGAAAATCCAAGTGATGGTGTCTCCCACCAATGCAGTGTGGGGACAGAATGTGACAGTAACCTgtaacaccacctgtactctgactgaTAACCACACCTACATTTGGTACATGAACGGACAACGTCTATCATCGTCATCCAAGTCCACATTGTCATCTACCAGTTATCATTCAACCAgttactcctgtgctgtaaaagGCTTTGAGGATCTCCTCTCTCCTGCAATGTGTctgcaggtgaaggtgactcCTGCCACAGAGAAAGGGAATctgacactgacctgtagcaccacctttACTCTGACTGAGAACCCCAAacccacctacatctggtacaagaacggacaacATCTCACCAACTCAAAGACTCTAGATAACTCCCTGATCCTAAACCCAGTCAGCAGTGAAGATGCAGGCAGATACACCTGTGCTGTAAAAGGCCACAATAATCTCTACATTCCTGAAGAGACTCTGACTGTAATTTcagcataccaccctgcatcccactgctggcaaGGGACAAGGGACACAGTAGACAATAGACAGGGAAACTCTAGTCCCATGAATGACAACATATCGGGCATGGCCATGACCCCTACTTCAGTACAGAGAGCAGACACAGACAACCAGGATGACGTTCACTACACCAGCATCCACTTCTCTGGCTCCAATAACCAGGAAGTGCCTCTGTACTCCACTGTCCAACTGCCTCAAACCCAGAAAGAGGATGAGGATGTCCAATACGCTGTTGTAAAATTCAACCGCTCCAGTGCTGCCCCCCCGACCTCTCTCACAGGAAGCTGAGGAGGTCTCCTCTGTGTTCTATAGAACAGTCAACGAACCCAGAACtaagaagacctgaacacaagATGATCTttgatgcatcccaaatggtacttTGTTCActctagtgcactatgtagggaatcgggtgccattttggatgcaagcCTGAACACCAGGCGACCTGAAAATAAGATGACTCTGCCTGGGATTCAAGCAAATTATGGACAAGCATCCTGCACTTTCATTTTACAGTTCATTTAAACCAACATCCGCAGCATTTAGCGCAAGTGTGATCTCTGCAAACGTCAGGAAAATTGTCTTTAAAAGCCTTATTATCGGCAGAAGACTAtcaacaagcatttcactacaccaacACACCCGCAATAACAATGCAAAATatgtgtgaccaataaactttgatttga

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036949151.1 True 1375 mRNA 0.47 7 16511861 16519036

Neighbor

gene id symbol gene type direction distance location
LOC118940336 LOC106590989 coding downstream 9766 16492789 ~ 16523216 (-)
LOC110512923 LOC106590932 coding downstream 31693 16471917 ~ 16544688 (-)
LOC110512844 pla2g6 coding downstream 111834 16373725 ~ 16400027 (-)
LOC110515368 LOC105012189 coding downstream 138421 16359346 ~ 16373440 (-)
LOC118940334 p40phox coding downstream 181831 16281397 ~ 16330030 (-)
LOC110494901 NA coding upstream 7472 16526508 ~ 16536613 (-)
LOC118940340 NA coding upstream 32007 16548237 ~ 16552794 (-)
LOC110508387 LOC106599573 coding upstream 45915 16564951 ~ 16674565 (-)
LOC110495074 LOC106564395 coding upstream 178275 16697311 ~ 16701828 (-)
LOC110494903 LOC106564394 coding upstream 187579 16706615 ~ 16711894 (-)
G1424072 NA non-coding downstream 48787 16462144 ~ 16463074 (-)
G1424063 NA non-coding downstream 64661 16446302 ~ 16447200 (-)
G1424056 LOC106591467 non-coding downstream 89197 16420499 ~ 16422664 (-)
G1424038 LOC106591467 non-coding downstream 93856 16412058 ~ 16418005 (-)
G1424052 NA non-coding downstream 100148 16411121 ~ 16411713 (-)
G1424129 NA non-coding upstream 54762 16573798 ~ 16575767 (-)
G1424143 NA non-coding upstream 88875 16607911 ~ 16631071 (-)
G1424097 NA non-coding upstream 144556 16663592 ~ 16664169 (-)
G1424186 NA non-coding upstream 172312 16691348 ~ 16691617 (-)
G1424051 cbx6 other downstream 101733 16406731 ~ 16410128 (-)
G1424040 NA other downstream 141418 16369757 ~ 16370443 (-)
G1423891 NA other downstream 525019 15985273 ~ 15986842 (-)
G1423836 NA other downstream 680851 15808686 ~ 15831010 (-)
G1424234 NA other upstream 251401 16770437 ~ 16772957 (-)
G1424227 NA other upstream 331715 16850751 ~ 16851486 (-)
G1424218 NA other upstream 336441 16855477 ~ 16938699 (-)
LOC110494935 LOC106590780 other upstream 444594 16939303 ~ 16968595 (-)

Expression


Co-expression Network