G1424129


Basic Information

Item Value
gene id G1424129
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 16573798 ~ 16575767 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1630379
gcatacgaccATAGATTAATTTGACTATACAAGTTTAcacacaattacaatggcaaagtcacaataatcacaagaatggcttcagatcaaagtctacgttgagaccgaagggcgcaagggtctttaaattaaagatccaggcagcctctcgttttaacaataaattatcaaggtcaccccctctcctagggagggtgacatgttcgatgccaatataacgcagagacgaaatcgagtggcctgcctccaagaagtgggccgcaactggataagtaaagtttttacacctaatggtgctacgatgctctgagatacgtacttttaattcgcgctttgttttacctacatcatttttaccacaaggacaagttataagataaataactgccttagtggagcacgtaataacaccttttattgggatcgatttagacgttgttcaggaatatcttggggtggtaaatcagagtttaccaattggtctctgagatttctgccccgcgagaatacgaccaagggaaggtccgaaaacacattaccgagactatcatcggattttagaatgtgccaatgtttgtgaacaattcccttaatttgttcagagcactttgaatagcgggtagttagaacgcaataatgcgtctttttgcgagactgaccttgaaaaaggtcatgtctcgttt
>TU1630380
TCACTGTTTATATTATAAGCTAATAGAAAGGGTAACAACCAATCAGGTAAtttccatccaTTAGGGGTgcaaatagacgttgttcaggaatatcttggggtggtaaatcagagtttaccaattggtctctgagatttctgccccgcgagaatacgaccaagggaaggtccgaaaacacattaccgagactatcatcggattttagaatgtgccaatgtttgtgaacaattcccttaatttgttcagagcactttgaatagcgggtagttagaacgcaataatgcgtctttttgcgagactgaccttgaaaaaggtcatgtctcgttt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1630379 False 683 lncRNA 0.41 2 16573798 16574577
TU1630380 True 327 lncRNA 0.40 2 16573798 16575767

Neighbor

gene id symbol gene type direction distance location
LOC118940340 NA coding downstream 21004 16548237 ~ 16552794 (-)
LOC110494901 NA coding downstream 37185 16526508 ~ 16536613 (-)
LOC118940337 NA coding downstream 54762 16511861 ~ 16519036 (-)
LOC118940336 LOC106590989 coding downstream 71703 16492789 ~ 16523216 (-)
LOC110512923 LOC106590932 coding downstream 93630 16471917 ~ 16544688 (-)
LOC110495074 LOC106564395 coding upstream 121544 16697311 ~ 16701828 (-)
LOC110494903 LOC106564394 coding upstream 130848 16706615 ~ 16711894 (-)
LOC110494948 LOC106564393 coding upstream 141329 16717096 ~ 16731389 (-)
LOC110494933 LOC106591120 coding upstream 160730 16736497 ~ 16741532 (-)
LOC110494924 LOC106592628 coding upstream 245464 16819145 ~ 16836715 (-)
G1424072 NA non-coding downstream 110724 16462144 ~ 16463074 (-)
G1424063 NA non-coding downstream 126598 16446302 ~ 16447200 (-)
G1424143 NA non-coding upstream 32144 16607911 ~ 16631071 (-)
G1424097 NA non-coding upstream 87825 16663592 ~ 16664169 (-)
G1424186 NA non-coding upstream 115581 16691348 ~ 16691617 (-)
G1424187 NA non-coding upstream 117110 16692877 ~ 16693163 (-)
G1424188 NA non-coding upstream 120818 16696585 ~ 16696812 (-)
G1424038 LOC106591467 other downstream 158939 16412058 ~ 16418005 (-)
G1424051 cbx6 other downstream 163670 16406731 ~ 16410128 (-)
G1424040 NA other downstream 203355 16369757 ~ 16370443 (-)
G1423891 NA other downstream 586956 15985273 ~ 15986842 (-)
G1423836 NA other downstream 742788 15808686 ~ 15831010 (-)
LOC110508387 LOC106599573 other upstream 79501 16564951 ~ 16674565 (-)
G1424234 NA other upstream 194670 16770437 ~ 16772957 (-)
G1424227 NA other upstream 274984 16850751 ~ 16851486 (-)
G1424218 NA other upstream 279710 16855477 ~ 16938699 (-)
LOC110494935 LOC106590780 other upstream 387863 16939303 ~ 16968595 (-)

Expression


Co-expression Network