ubap2a (LOC106565184)


Basic Information

Item Value
gene id ubap2a
gene name LOC106565184
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 48194992 ~ 48235191 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036949998.1
AAGAGGAGGAAACACGCGCGTCTGCGCAGTTGTCTCTCACGACCACAGAGGAGAGCGACTACAGCAACGCCGTATATCACGTGACCTTGTGCTGGCTGAGTGAATCGTGTTAGCAGATTTTTCTATTTTGTACATACATtgttttgtatatactgtatatgatgaCATCGTTGGGCGGCGACAAAGCCCGGGGCACTCGGGACAAAGCGCTGCCTGCTGCCACACACGCAACTCAACCACAGAAACAGCTCCAGGCGACTGCAGAACAGATCCGACTCGCCCAGATGATCTATGACAAGAATGATGCTGAGTTTGAGGACAAAGTGAACCAGCTGATGGAGGTGACAGGAAAGATCCAGGATGAATGCATGGTAGCGCTCCACGACTGCAACGAGGATGTCAACAGAGCCATCAACTTCCTCCTTGAGAGCACCTCTGATACGacctCATGGGAGACAGTTGGGAAGAAGAAACCCCTAGCGAAGGACGGCCCGACGGAGGGCAAGGAGAAccgggagaagagaggaggagagcgagagggcaGCAGGGGCCGCGGAGGAAGCAATCGGAGAGGCAGGGGGGCCAGCAACCGCAGCCGCCAGGTTGAGAGAGTGCGGCCAGAGGAAAATGGTGTGGAGGCGGTCCCTGGCCCTTTGGACAGAGTGTCAGAGCGAGGTCGCAGGGGGGGAAGAGGGGGTAGAGGTGAGTGTCAATTAGTGGCACTTTCTCATATGTTCCAGTCAACACTCCCAGTCGGATCTGGAGGCAGAGGAAGGGGCAGGGCACCAGCGGGTAGCAGGTTCTCAGCCCAGGGAATGGGgaccTTTAACCCAGCAGACTACACCCCAGAACAGGGGACAGGGACCACACAAGGTGACACTTGGGAGTCAGGGGCCAGCAACAGCACAGACGGGACAGTGGCCTGGAGGAGTACTCTGGAAGACTGGGCTGCTGAGGACTGGagcgaagagatgagtctCTCCGAGACCAAAGTGTTCACCGCCTCAAGTGCACCTGCACCTCAGAACCACCTCACACCTGGGCAAAGTCTGGACCTGCCCTCTCTGCTGCAGAAGCCAgtgggagaaggaagaggaggaggaggggatgccCCCTCTACACAGAGCCTGGTTTTCACCAACTCCCACCATCACCCCCCCCGCAACGGGTCGGCCATTGGCACAGGCAGCACCAGCTATGCACACGCCGCCCTGTCGTCAGTGCTAGGGGCAGGTTTCGGGGACCTGGGCCAGTCTAAGAGGAGTCAGTCCAGTCCGGGGGCCCAGATCTTGGAGCAGCTGAAGGGCCCGGGCCTgggtcctctcccatcctcccaggcAGCCCCCCCTCCCAGCACTCAGGGGGCCAGTAACACCTCTCTGGGGAGTAGACTCCCAGGGGTAGGAGGAGCCGCTCCTGTTCTCCCACCGCCTTCCACTTCAAGCTGGGATATCAAGATCCCAGAGCCCAGCGCCACATCCTCCTCACACACCTCCCACTTCAGCCGGGACTTTAAGCTGCAGCCTGAGCCATCCCTGGTGCTGAGCCAGCTGGCCCAGAAACACGGCGCCCCCTCTCTGCCCATTGCtcgccagcccagcccagcccaatctccctcccccatccagggACCCCCCCTGGCCACCATCGGTGCCAAGCCTGCCCACAGCGCCGGGCCGGACACTCAAGGCAGCAACTCGCTGCAGCAGCACCGCGTTCCACAGCTAAAGGCCCAGAAACGAAGGATACCTCCCACCTCTAAGATCCCCTCGTCGGCGGTGGAAATGCCTGGCACTGCCGACGTCCCCGGTCTTAACGTTCAGTTTGGAGCACTGGACTTTGGCTCGGAGGCAGCCCTGCCGGACTTTGGCCCCGTGGAGACGTGTGTCACCGGGGGCTCCAGGGAGTCCACCCCGGCCCCACAGAGCCAGACCAACCTCTATTCCAATCACCTCAGTGAATCTATGAGCACCCCTCTTTCcgtcaccctccctctctcatcctctgagCCTGTCTACCACTCCCCGTCGGTGCCCATGCCCAGCCTGACCACCTCCTCTATGGGTACAGTCAGCTCCTCcactccatcctcctccatctcctcctcggtgccctcctcctcttccacgtCTCCCTTTGTCTCAGTGGGGAGCGGTTATGACTGTGGGCCTGTGGCCCCTCACTCACACCTGGCCTTCTCCCAGAGCAAAGAGGCACCCGGGCCAATCATGAACGGTCTGAACGGTGTGAGGACGTCTGCTATGGACCctTCATCAGCCTCCTCTACGCCAAAGCCGGAGTCTCCCTCTCTGAGCATCAGTACCAGCAGTGCCCCTGCCCCCTCTGCCCTCATGCCCTCCTCCATACCCTCCCACAGCTCGGCACTCCCCAGTCTGCCACACGACATGCCCTCTGCCAGCCTGGCACCACTCAGCAGCCATGGCAGCAGTAGTCATTCCTCTCTCACTtataccagtgtagacagtagtgtgagCTCTCTGGCACCCTCGTCTGGCTCCTACTCCTCTGCCCAGGCCCCAGCCCAGTCACTCCACCAGGTCAACAGCGGCATGGCTCACATCATGGGCACCATGAGCCACATGAACAGCATGGTCAGTAGCATGGGTGGCAGCGGGCATCACGCCAGCCAAGCACTGGGGCTCAGTGCCAACGGGACCACGGCCCAAGCGAACCTCTCCTCGGCCCCCAGGACCGCACCGCTGCTCTCCTCCTCAACTgGTAAAGCTCCTCCTAACCTGTCTCAGGGGGTTCCCCCACTACTGCCCAACCAGTACATCATGGGCCCAGGAGGCCTGCTGCCTGCCTACCCGCAGATCTACGGCTATGAGGACCTCCACATGCTACAGTCCAGACTGCCTATGCCCTCTTTGCAGGATTACTACGGAATCACATTCCCTGGTCCTGCAGCACTCTCTGGCAGAGATGGGAGCCTCACCAATAACCCCTACTCAGGTGAAGTCACAAAGTTTGGCAGGGGTGACTCCACCTCCCCTGCGCCTAGCAGCTTGTCGGCCCAACAGCAGCCCCAACAGGGCCAGAGCCAAGGGCAGAACCAGGCCCAGCCACAAcccccccagccccagcctcaagGCCAACCCCAGGGCCACCACAACAGCCAGCAGCAGCAGGCCTTCCTCCCGCCAGGCTACAGCTACACAGGCCTGCCCTACTACCCCGGGATGCCTGGCGCTGCCTTCCAGTACGGCCACACCATGTTCATGCCCCAGGGACAGGGGCCAGCCAAGCAGCACGGTGTGGGTTTGGGAAACCCCTCAGCCAGCCCCTTCCAGCAGCAGCAGCCCAGTGGCTACGGCCAGCACACCTTCAGCTCAGGGTATGAGGACCTGACCCAGGGCCAAGCAGGAGTAGACTATAGCAAGGGATATAGCAACTCCTCCCAGAGCCAGGCCAAATCTGCTACCACAGGCCCCGGTAAAGGCGGCATCTCTGTGACGTCAGGCAACTCCGGGGTCCCAGAAATCAGTGGAAGTGTTTACAACAAGACCCAGTCCTTTGATAAGCAGGGATTCCATGCGGGGACTCCCCCTCCTTTCAACCTGCCTTCGGCTATGGGGGGTCCTGGAGGGGCCCCGGGTGGCTACGCTCCCGCCCCCTTCCTCCACATCCTGCAGCCTGCCCACCAGCAACCCCACTCCCAGATGCTGCACCATCATCTGGCCCAGGACGGACAGGGAGGTCCTAGCCAGCGAGGCCAGTCTAGCAGCATGCAGCAGAAGAGCCAGGTCAACAAGTCCAGCTACGGCAGCTCCCCATACTGGGGCAActgacagggctgtgtgtgtacacactgcATCATGCCCTATCAgaccagagggggggggggacaaagtaTTTTACAACACCAGGctaaaacacacactaacacccccctccccactcatTATTCCCCTTTAAAAATGTATGGCTGttgtatgtaaaatatatttatgtatgtatttatacagtatatatgtattaGTAGGACATGAAATTTGGTTTAGATTTTTTTGAAGGATGATAGGAGTCAAATATCATGAAGTTGGTGAATATACAGTACTTGAACAAG
>XM_036949999.1
AAGAGGAGGAAACACGCGCGTCTGCGCAGTTGTCTCTCACGACCACAGAGGAGAGCGACTACAGCAACGCCGTATATCACGTGACCTTGTGCTGGCTGAGTGAATCGTGTTAGCAGATTTTTCTATTTTGTACATACATtgttttgtatatactgtatatgatgaCATCGTTGGGCGGCGACAAAGCCCGGGGCACTCGGGACAAAGCGCTGCCTGCTGCCACACACGCAACTCAACCACAGAAACAGCTCCAGGCGACTGCAGAACAGATCCGACTCGCCCAGATGATCTATGACAAGAATGATGCTGAGTTTGAGGACAAAGTGAACCAGCTGATGGAGGTGACAGGAAAGATCCAGGATGAATGCATGGTAGCGCTCCACGACTGCAACGAGGATGTCAACAGAGCCATCAACTTCCTCCTTGAGAGCACCTCTGATACGacctCATGGGAGACAGTTGGGAAGAAGAAACCCCTAGCGAAGGACGGCCCGACGGAGGGCAAGGAGAAccgggagaagagaggaggagagcgagagggcaGCAGGGGCCGCGGAGGAAGCAATCGGAGAGGCAGGGGGGCCAGCAACCGCAGCCGCCAGGTTGAGAGAGTGCGGCCAGAGGAAAATGGTGTGGAGGCGGTCCCTGGCCCTTTGGACAGAGTGTCAGAGCGAGGTCGCAGGGGGGGAAGAGGGGGTAGAGTCGGATCTGGAGGCAGAGGAAGGGGCAGGGCACCAGCGGGTAGCAGGTTCTCAGCCCAGGGAATGGGgaccTTTAACCCAGCAGACTACACCCCAGAACAGGGGACAGGGACCACACAAGGTGACACTTGGGAGTCAGGGGCCAGCAACAGCACAGACGGGACAGTGGCCTGGAGGAGTACTCTGGAAGACTGGGCTGCTGAGGACTGGagcgaagagatgagtctCTCCGAGACCAAAGTGTTCACCGCCTCAAGTGCACCTGCACCTCAGAACCACCTCACACCTGGGCAAAGTCTGGACCTGCCCTCTCTGCTGCAGAAGCCAgtgggagaaggaagaggaggaggaggggatgccCCCTCTACACAGAGCCTGGTTTTCACCAACTCCCACCATCACCCCCCCCGCAACGGGTCGGCCATTGGCACAGGCAGCACCAGCTATGCACACGCCGCCCTGTCGTCAGTGCTAGGGGCAGGTTTCGGGGACCTGGGCCAGTCTAAGAGGAGTCAGTCCAGTCCGGGGGCCCAGATCTTGGAGCAGCTGAAGGGCCCGGGCCTgggtcctctcccatcctcccaggcAGCCCCCCCTCCCAGCACTCAGGGGGCCAGTAACACCTCTCTGGGGAGTAGACTCCCAGGGGTAGGAGGAGCCGCTCCTGTTCTCCCACCGCCTTCCACTTCAAGCTGGGATATCAAGATCCCAGAGCCCAGCGCCACATCCTCCTCACACACCTCCCACTTCAGCCGGGACTTTAAGCTGCAGCCTGAGCCATCCCTGGTGCTGAGCCAGCTGGCCCAGAAACACGGCGCCCCCTCTCTGCCCATTGCtcgccagcccagcccagcccaatctccctcccccatccagggACCCCCCCTGGCCACCATCGGTGCCAAGCCTGCCCACAGCGCCGGGCCGGACACTCAAGGCAGCAACTCGCTGCAGCAGCACCGCGTTCCACAGCTAAAGGCCCAGAAACGAAGGATACCTCCCACCTCTAAGATCCCCTCGTCGGCGGTGGAAATGCCTGGCACTGCCGACGTCCCCGGTCTTAACGTTCAGTTTGGAGCACTGGACTTTGGCTCGGAGGCAGCCCTGCCGGACTTTGGCCCCGTGGAGACGTGTGTCACCGGGGGCTCCAGGGAGTCCACCCCGGCCCCACAGAGCCAGACCAACCTCTATTCCAATCACCTCAGTGAATCTATGAGCACCCCTCTTTCcgtcaccctccctctctcatcctctgagCCTGTCTACCACTCCCCGTCGGTGCCCATGCCCAGCCTGACCACCTCCTCTATGGGTACAGTCAGCTCCTCcactccatcctcctccatctcctcctcggtgccctcctcctcttccacgtCTCCCTTTGTCTCAGTGGGGAGCGGTTATGACTGTGGGCCTGTGGCCCCTCACTCACACCTGGCCTTCTCCCAGAGCAAAGAGGCACCCGGGCCAATCATGAACGGTCTGAACGGTGTGAGGACGTCTGCTATGGACCctTCATCAGCCTCCTCTACGCCAAAGCCGGAGTCTCCCTCTCTGAGCATCAGTACCAGCAGTGCCCCTGCCCCCTCTGCCCTCATGCCCTCCTCCATACCCTCCCACAGCTCGGCACTCCCCAGTCTGCCACACGACATGCCCTCTGCCAGCCTGGCACCACTCAGCAGCCATGGCAGCAGTAGTCATTCCTCTCTCACTtataccagtgtagacagtagtgtgagCTCTCTGGCACCCTCGTCTGGCTCCTACTCCTCTGCCCAGGCCCCAGCCCAGTCACTCCACCAGGTCAACAGCGGCATGGCTCACATCATGGGCACCATGAGCCACATGAACAGCATGGTCAGTAGCATGGGTGGCAGCGGGCATCACGCCAGCCAAGCACTGGGGCTCAGTGCCAACGGGACCACGGCCCAAGCGAACCTCTCCTCGGCCCCCAGGACCGCACCGCTGCTCTCCTCCTCAACTgGTAAAGCTCCTCCTAACCTGTCTCAGGGGGTTCCCCCACTACTGCCCAACCAGTACATCATGGGCCCAGGAGGCCTGCTGCCTGCCTACCCGCAGATCTACGGCTATGAGGACCTCCACATGCTACAGTCCAGACTGCCTATGCCCTCTTTGCAGGATTACTACGGAATCACATTCCCTGGTCCTGCAGCACTCTCTGGCAGAGATGGGAGCCTCACCAATAACCCCTACTCAGGTGAAGTCACAAAGTTTGGCAGGGGTGACTCCACCTCCCCTGCGCCTAGCAGCTTGTCGGCCCAACAGCAGCCCCAACAGGGCCAGAGCCAAGGGCAGAACCAGGCCCAGCCACAAcccccccagccccagcctcaagGCCAACCCCAGGGCCACCACAACAGCCAGCAGCAGCAGGCCTTCCTCCCGCCAGGCTACAGCTACACAGGCCTGCCCTACTACCCCGGGATGCCTGGCGCTGCCTTCCAGTACGGCCACACCATGTTCATGCCCCAGGGACAGGGGCCAGCCAAGCAGCACGGTGTGGGTTTGGGAAACCCCTCAGCCAGCCCCTTCCAGCAGCAGCAGCCCAGTGGCTACGGCCAGCACACCTTCAGCTCAGGGTATGAGGACCTGACCCAGGGCCAAGCAGGAGTAGACTATAGCAAGGGATATAGCAACTCCTCCCAGAGCCAGGCCAAATCTGCTACCACAGGCCCCGGTAAAGGCGGCATCTCTGTGACGTCAGGCAACTCCGGGGTCCCAGAAATCAGTGGAAGTGTTTACAACAAGACCCAGTCCTTTGATAAGCAGGGATTCCATGCGGGGACTCCCCCTCCTTTCAACCTGCCTTCGGCTATGGGGGGTCCTGGAGGGGCCCCGGGTGGCTACGCTCCCGCCCCCTTCCTCCACATCCTGCAGCCTGCCCACCAGCAACCCCACTCCCAGATGCTGCACCATCATCTGGCCCAGGACGGACAGGGAGGTCCTAGCCAGCGAGGCCAGTCTAGCAGCATGCAGCAGAAGAGCCAGGTCAACAAGTCCAGCTACGGCAGCTCCCCATACTGGGGCAActgacagggctgtgtgtgtacacactgcATCATGCCCTATCAgaccagagggggggggggacaaagtaTTTTACAACACCAGGctaaaacacacactaacacccccctccccactcatTATTCCCCTTTAAAAATGTATGGCTGttgtatgtaaaatatatttatgtatgtatttatacagtatatatgtattaGTAGGACATGAAATTTGGTTTAGATTTTTTTGAAGGATGATAGGAGTCAAATATCATGAAGTTGGTGAATATACAGTACTTGAACAAG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036949998.1 False 4087 mRNA 0.59 27 48194992 48235191
XM_036949999.1 True 4036 mRNA 0.60 27 48194992 48235191

Neighbor

gene id symbol gene type direction distance location
dcaf12 LOC106565186 coding upstream 15729 48152982 ~ 48179263 (+)
ubap1 LOC106565187 coding upstream 47748 48103537 ~ 48147244 (+)
glrx LOC106565191 coding upstream 158407 48030892 ~ 48036585 (+)
LOC110493997 LOC106565193 coding upstream 168330 48001270 ~ 48026662 (+)
LOC110493996 LOC106565313 coding upstream 209388 47980981 ~ 47985604 (+)
LOC110494009 LOC106565181 coding downstream 72634 48307825 ~ 48329446 (+)
tpgs2 tpgs2 coding downstream 113774 48348965 ~ 48354058 (+)
LOC110494013 LOC106565177 coding downstream 153902 48389082 ~ 48424478 (+)
LOC110494016 LOC106565178 coding downstream 274686 48509877 ~ 48515292 (+)
LOC110494018 LOC106565175 coding downstream 344119 48579310 ~ 48583667 (+)
G1457093 NA non-coding upstream 107170 48087605 ~ 48087822 (+)
G1457091 NA non-coding upstream 118310 48076366 ~ 48076682 (+)
G1457051 NA non-coding upstream 217853 47976934 ~ 47977139 (+)
G1456920 NA non-coding upstream 466957 47727795 ~ 47728035 (+)
G1456883 LOC106565198 non-coding upstream 480245 47713943 ~ 47714747 (+)
G1457153 NA non-coding downstream 30773 48265964 ~ 48266185 (+)
G1457154 NA non-coding downstream 31355 48266546 ~ 48266927 (+)
G1457155 NA non-coding downstream 32229 48267420 ~ 48267733 (+)
G1457156 NA non-coding downstream 32685 48267876 ~ 48268092 (+)
G1457157 NA non-coding downstream 33431 48268622 ~ 48268881 (+)
G1456969 NA other upstream 355622 47833580 ~ 47839370 (+)
LOC100135862 LOC106565314 other upstream 387511 47805358 ~ 47807518 (+)
G1456570 NA other upstream 966196 47228219 ~ 47228796 (+)
G1454824 NA other upstream 2336491 45856249 ~ 45858501 (+)
bsnb LOC106565168 other downstream 458130 48693321 ~ 48814670 (+)
erc2 LOC106583361 other downstream 687616 48866589 ~ 49040356 (+)
G1458807 NA other downstream 1203815 49439006 ~ 49439329 (+)
LOC110494957 qrich1 other downstream 1945974 50181045 ~ 50192699 (+)

Expression


Co-expression Network