LOC110494047 (btg2)


Basic Information

Item Value
gene id LOC110494047
gene name btg2
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 50894903 ~ 50897444 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021568732.2
CATCCATTCTCTGTCCCTTGATAAAAAGAGGCCACAAGACGTAATGTAAGCACAAAGAGAACTTGGAAGTGCTGTTTGAGAGGCCACAGCATCAAGCGAAACATTTTTTGGGGATAAAGAATGCTGATTGTTACGTTGGCCAGAGCCAACTTGGTGCGTTGATATTACTGCTTCTGACTTGAAGATTCCATTTACTGAAGGATTCGCCCTGGACTGGAGTGAGGCCCACATATCTTTTTcagttagctagccaacgttagttTACGGTACCTCTGCTTCACACTGCATTCCTGACgaaaaaaaacgtattatttTCTACGAGCTGAAGTAACTATTTTTGCGGGCAAAATGAACCAAGCATACTCTTCTAGAAGTGAAATAGGCCCCGAAGTAACGGCCGCAGCAACCTTTGTTTCCAGGCTATTGAGAACAAGAGGCTTCCTGAGCGAACACCAACTCCATGATTTCAGAGATTGTCTTCAACAGTCATTATCAGAGCACTACCAGAACCACTGGTTCCCTGACAGACCACAGAAGGGCTCTGGCTACCGCTGCATCAGAATGAATCATGAAATGGACCCAATCATTGGCAGGGCTGCTGGTCGGATCGGACTTACTAGCGATCAGCTCTTTGCCCTCCTTCCCCGGGAGCTGACACTCTGGGTGGACCCTTTTGAGGTCTCTTACCGCATCGGGGAGGATGGCTCCATCTGTGTCCTCTATGAGGCAGAGTCCCTAGCGCCCGCAGCAGCCCCTAGCCCTGACCCCACACACAACTGCAAGAATCAGTTTCTGATCGGTGGCCGCACTAGCCCTCCGAAGAACTACCTGATGACTGTCTCGAGCTAGTGTGGTTCAGGCACTACTGCGACGCCAAACAGCATCGGTGTGAAGGCCATCGACCACCCACAGTGATCCTTTTTGTATTTTCATTTCATAGTGTTTCCCCCTATTAAATGAACTTGATTGCTTATTTAATTGAATTTGCGTATTCTAAAAGCACCTGGTATTTGTTAGAGCGTTGGGTAGCACTTTTGAATGTTTGACTACCGGCCCATAGGCTCTAATTGCACTGCTGAGACTCAGTATGTAGTGTGCATATGTCCTGTGGTATTAGCACACTACATGCAAGCATGGGCTTTGTTAAGTGTAAACACAACATCTGGGATTCTGATGCTAGTTTCTCATGGTGTAATAATACTTCACGCCACTTCCCACACATGTAAACTAAAACAATCGTATAACTGGAGTCAAGTATTTGTTCAGAAAcctatacatttacaaaaatgtggtTTTATAATTCAGTTCACTGCTGGTTTGTAATCTTACGGGACCACGTCACCTATCTGTGCCCTGAAATCAAAGACCCAAGACAAAATGTCTGACTTCCCAGTTGCAAAAAAAGCTGCCTCTAAAAAGGTGAGGTCTGCTGCCCAAACACCTTTGAGGAATACTGCCTAACTTTCATAGATCCTTTTTTCACAATAGTCAGTGTTCAGAAAATTGGAGTATGTCAATCTCTAATTTCACACCTCTTGCATCCCAGTAGACATAACATTAATCATTTAAAATGGCTTCTGCTGTCAACATGTTCAAAAAGGGGTTAGGATTTAAATATTTCACTATTGTGAATTTTGTTGTTGGGAAGTCTTCTGTTATCCCCCCCCAGGTAGAATAAGCTGTGAGGTGGTTGTTGGCGTCATTTTAACGTCTAGCACTGCCAGGTAGTGTGGTGCTCTCAGCCCTCTGTAGCATCCTCTTCTTCCTACCGAGCTGTTGAGCAGCTCACCATTGCTTACTGTTCtagacaggggaaggatatagTTTGTAAGCTATTTGAAGCACAGTAAGCATTTAAAGTAACTATTTTAAATGACTTTTGTGCATCTATAAATATTTGTACAGTTTGTCACAATTTTATTACAATAAACCTTTATGAATTCA
>TU1670568
GACGTAATGTAAGCACAAAGAGAACTTGGAAGTGCTGTTTGAGAGGCCACAGCATCAAGCGAAACATTTTTTGGGGATAAAGAATGCTGATTGTTACGTTGGCCAGAGCCAACTTGGTGCGTTGATATTACTGCTTCTGACTTGAAGATTCCATTTACTGAAGGATTCGCCCTGGACTGGAGTGAGGCCCACATATCTTTTTcagttagctagccaacgttagttTACGGTACCTCTGCTTCACACTGCATTCCTGACgaaaaaaaacgtattatttTCTACGAGCTGAAGCTATTGAGAACAAGAGGCTTCCTGAGCGAACACCAACTCCATGATTTCAGAGATTGTCTTCAACAGTCATTATCAGAGCACTACCAGAACCACTGGTTCCCTGACAGACCACAGAAGGGCTCTGGCTACCGCTGCATCAGAATGAATCATGAAATGGACCCAATCATTGGCAGGGCTGCTGGTCGGATCGGACTTACTAGCGATCAGCTCTTTGCCCTCCTTCCCCGGGAGCTGACACTCTGGGTGGACCCTTTTGAGGTCTCTTACCGCATCGGGGAGGATGGCTCCATCTGTGTCCTCTATGAGGCAGAGTCCCTAGCGCCCGCAGCAGCCCCTAGCCCTGACCCCACACACAACTGCAAGAATCAGTTTCTGATCGGTGGCCGCACTAGCCCTCCGAAGAACTACCTGATGACTGTCTCGAGCTAGTGTGGTTCAGGCACTACTGCGACGCCAAACAGCATCGGTGTGAAGGCCATCGACCACCCACAGTGATCCTTTTTGTATTTTCATTTCATAGTGTTTCCCCCTATTAAATGAACTTGATTGCTTATTTAATTGAATTTGCGTATTCTAAAAGCACCTGGTATTTGTTAGAGCGTTGGGTAGCACTTTTGAATGTTTGACTACCGGCCCATAGGCTCTAATTGCACTGCTGAGACTCAGTATGTAGTGTGCATATGTCCTGTGGTATTAGCACACTACATGCAAGCATGGGCTTTGTTAAGTGTAAACACAACATCTGGGATTCTGATGCTAGTTTCTCATGGTGTAATAATACTTCACGCCACTTCCCACACATGTAAACTAAAACAATCGTATAACTGGAGTCAAGTATTTGTTCAGAAAcctatacatttacaaaaatgtggtTTTATAATTCAGTTCACTGCTGGTTTGTAATCTTACGGGACCACGTCACCTATCTGTGCCCTGAAATCAAAGACCCAAGACAAAATGTCTGACTTCCCAGTTGCAAAAAAAGCTGCCTCTAAAAAGGTGAGGTCTGCTGCCCAAACACCTTTGAGGAATACTGCCTAACTTTCATAGATCCTTTTTTCACAATAGTCAGTGTTCAGAAAATTGGAGTATGTCAATCTCTAATTTCACACCTCTTGCATCCCAGTAGACATAACATTAATCATTTAAAATGGCTTCTGCTGTCAACATGTTCAAAAAGGGGTTAGGATTTAAATATTTCACTATTGTGAATTTTGTTGTTGGGAAGTCTTCTGTTATCCCCCCCCAGGTAGAATAAGCTGTGAGGTGGTTGTTGGCGTCATTTTAACGTCTAGCACTGCCAGGTAGTGTGGTGCTCTCAGCCCTCTGTAGCATCCTCTTCTTCCTACCGAGCTGTTGAGCAGCTCACCATTGCTTACTGTTCtagacaggggaaggatatagTTTGTAAGCTATTTGAAGCACAGTAAGCATTTAAAGTAACTATTTTAAATGACTTTTGTGCATCTATAAATATTTGTACAGTTTGTCACAATTTTATTACAATAAACCTTTATGAATTCA

Function

symbol description
btg2 Predicted to be involved in negative regulation of cell population proliferation and negative regulation of mitotic cell cycle. Predicted to be active in cytoplasm and nucleus. Is expressed in several structures, including brain; hindbrain neural plate; hypoblast; mesoderm; and neural tube. Orthologous to human BTG2 (BTG anti-proliferation factor 2).

NR:

description
protein BTG2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021568732.2 False 1944 mRNA 0.44 2 50894903 50897444
TU1670568 True 1815 TUCP 0.44 3 50894940 50897444

Neighbor

gene id symbol gene type direction distance location
rbbp5 LOC106565113 coding upstream 33805 50852607 ~ 50861098 (+)
LOC110494043 LOC106565114 coding upstream 54499 50837015 ~ 50840404 (+)
LOC110493204 NA coding upstream 65704 50825463 ~ 50829199 (+)
LOC118936400 NA coding upstream 75851 50816422 ~ 50819052 (+)
dram2b tmm77 coding upstream 136158 50753871 ~ 50758745 (+)
apobec2a LOC100196684 coding downstream 155238 51052682 ~ 51062761 (+)
csf1 csf1 coding downstream 703989 51601433 ~ 51640412 (+)
LOC110494059 nfasc coding downstream 1069595 51967039 ~ 52121978 (+)
LOC110494060 LOC106565094 coding downstream 1293155 52190599 ~ 52273991 (+)
LOC110494061 LOC106565309 coding downstream 1376810 52274254 ~ 52280244 (+)
G1460177 NA non-coding upstream 8347 50886225 ~ 50886556 (+)
G1460176 NA non-coding upstream 9135 50885547 ~ 50885768 (+)
G1459816 LOC106565111 non-coding upstream 27743 50866886 ~ 50867160 (+)
G1459815 LOC106565111 non-coding upstream 28218 50862668 ~ 50866685 (+)
G1459797 NA non-coding upstream 79021 50815657 ~ 50815882 (+)
G1460190 NA non-coding downstream 9299 50906743 ~ 50906946 (+)
G1460205 NA non-coding downstream 30108 50927552 ~ 50928158 (+)
G1460203 NA non-coding downstream 32594 50930038 ~ 50931328 (+)
G1460202 NA non-coding downstream 33998 50931442 ~ 50933523 (+)
G1460201 NA non-coding downstream 43314 50940758 ~ 50941260 (+)
G1459769 NA other upstream 117831 50776529 ~ 50777072 (+)
atxn7l2a LOC106565127 other upstream 459197 50427145 ~ 50437612 (+)
LOC110494957 qrich1 other upstream 711207 50181045 ~ 50192699 (+)
G1458807 NA other upstream 1455574 49439006 ~ 49439329 (+)
erc2 LOC106583361 other upstream 1854547 48866589 ~ 49040356 (+)
G1460249 LOC106565103 other downstream 182688 51080132 ~ 51137770 (+)
G1464092 LOC106565344 other downstream 3276570 54147039 ~ 54189617 (+)
LOC110494100 LOC106565348 other downstream 3358937 54256327 ~ 54264616 (+)
LOC110494110 LOC106565356 other downstream 3574261 54471705 ~ 54474472 (+)
G1466124 NA other downstream 5099204 55996648 ~ 55998347 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
eurasian perch (Perca fluviatilis) G190668 NA non-coding NC_053130.1 CM020927.1 1393388 ~ 1408170 (+)