G1460190


Basic Information

Item Value
gene id G1460190
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048581.1
NCBI id CM023235.2
chromosome length 95212422
location 50906743 ~ 50906946 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1670574
ccatgtctcaaggcttaaaaatccttcttgaacctgtttcctctccttcatctacactgattgaagtggattcaacaagtgacatcaataagggatcatagctttcacctggatccacctggtcagtccatgtcatggaaagagcaagtgttcctaatgttttgtacactcagtgtatacagtgcatACGGAAAAAATATTCAG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1670574 True 204 lncRNA 0.41 1 50906743 50906946

Neighbor

gene id symbol gene type direction distance location
LOC110494047 btg2 coding upstream 9299 50894903 ~ 50897444 (+)
rbbp5 LOC106565113 coding upstream 45645 50852607 ~ 50861098 (+)
LOC110494043 LOC106565114 coding upstream 66339 50837015 ~ 50840404 (+)
LOC110493204 NA coding upstream 77544 50825463 ~ 50829199 (+)
LOC118936400 NA coding upstream 87691 50816422 ~ 50819052 (+)
apobec2a LOC100196684 coding downstream 145736 51052682 ~ 51062761 (+)
csf1 csf1 coding downstream 694487 51601433 ~ 51640412 (+)
LOC110494059 nfasc coding downstream 1060093 51967039 ~ 52121978 (+)
LOC110494060 LOC106565094 coding downstream 1283653 52190599 ~ 52273991 (+)
LOC110494061 LOC106565309 coding downstream 1367308 52274254 ~ 52280244 (+)
G1460177 NA non-coding upstream 20187 50886225 ~ 50886556 (+)
G1460176 NA non-coding upstream 20975 50885547 ~ 50885768 (+)
G1459816 LOC106565111 non-coding upstream 39583 50866886 ~ 50867160 (+)
G1459815 LOC106565111 non-coding upstream 40058 50862668 ~ 50866685 (+)
G1459797 NA non-coding upstream 90861 50815657 ~ 50815882 (+)
G1460205 NA non-coding downstream 20606 50927552 ~ 50928158 (+)
G1460203 NA non-coding downstream 23092 50930038 ~ 50931328 (+)
G1460202 NA non-coding downstream 24496 50931442 ~ 50933523 (+)
G1460201 NA non-coding downstream 33812 50940758 ~ 50941260 (+)
G1460171 NA non-coding downstream 39832 50946778 ~ 50950543 (+)
G1459769 NA other upstream 129671 50776529 ~ 50777072 (+)
atxn7l2a LOC106565127 other upstream 471037 50427145 ~ 50437612 (+)
LOC110494957 qrich1 other upstream 723047 50181045 ~ 50192699 (+)
G1458807 NA other upstream 1467414 49439006 ~ 49439329 (+)
G1460249 LOC106565103 other downstream 173186 51080132 ~ 51137770 (+)
G1464092 LOC106565344 other downstream 3267068 54147039 ~ 54189617 (+)
LOC110494100 LOC106565348 other downstream 3349435 54256327 ~ 54264616 (+)
LOC110494110 LOC106565356 other downstream 3564759 54471705 ~ 54474472 (+)
G1466124 NA other downstream 5089702 55996648 ~ 55998347 (+)

Expression


Co-expression Network