XLOC_033449 (clcn3)


Basic Information

Item Value
gene id XLOC_033449
gene name clcn3
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007118.7
NCBI id CM002891.2
chromosome length 74282399
location 7511914 ~ 7643941 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00065475
CGTTagcggagcagaaaaacacaGGCACAAACGGAGGATAAAATGCGTCCTCGTGTTGGGTTTGTGCTGCTGGGATGATCCGCGGTTTCAGAGCTCGTTTCGAGGCATCGCAGAGggtgTTGTGCTGCTAAATGGAGTCTGAGCAGTTGTTCAACAGAGGCTACGGCAGAAACAGCTACAACAGCATCACCAGCGCCAGCAGTGACGAAGAGCTCCTGGATGGAGCCGGAGTCATCATGGACTTCCACACCACTGAGGACGACAACCTGCTGGACGGAGACGCCTCTCCAGgGTCGAACTACGCCATGTCTAATGGGGGTGGAGGAGGGGGAGGAGCTAGTAGCTCCACCCACCTGCTGGATCTGCTGGAAGAGCCCATTCCTGGAGTGGGGACCTACGACGACTTCCACACCATCGACTGGGTCCGAGAGAAATGCAAAGACAGAGAGCGACACCGCAAGATAAACAGCAAAAAGAAGGAGTCAGCATGGGAATTCACCAAGAGTCTCTACGACGCCTGGTCCGGCTGGCTGGTGGTCACACTGACAGGACTCGCatcagGAGCGTTAGCTGGCGGGATCGACATCGCCGCCGACTGGATGAACGACCTGAAGGAGGGCGTGTGTCTTAGTGCCATGTGGTTCAATCACGAGCAGTGCTGCTGGGGCTCCAACAAGACCACCTTCGCCGAGAGAGACAAGTGTCCTCAGTGGAAGACATGGGCCGAGCTGATCCTGGGTCAGGAACAGGGTCCCGGCTCGTACATCATGAACTACTTCATGTTCACCTTCTGGGCTTTGTCTTTCGCTTTTCTGGCCGTGTCTCTGGTGAAGGTGTTTGCGCCGTATGCCTGCGGCTCTGGAATACCTGAGATTAAAACCATCCTGAGTGGCTTCATCATCCGCGGGTACCTGGGCAAGTGGACTCTGATGATCAAGACCATCACTCTGGTTCTTGCTGTGGCGTCTGGCCTCAGTCTGGGAAAGGAGGGTCCGCTGGTTCACGTGGCCTGCTGCTGCGGGAACATCTTCTCATATCTCTTCCCCAAATACAGCAAGAACGAGGCTAAGAAGCGAGAGGTTCTGTCGGCGGCGTCGGCTGCTGGTGTTTCTGTGGCTTTTGGGGCTCCGATTGGAGGAGTTTTGTTCAGTCTGGAGGAGgtgagTTATTACTTCCCTCTGAAGACTCTGTGGCGCTCGTTCTTCGCTGCTCTGGTGGCTGCTTTTGTGCTGCGCTCCATCAACCCGTTCGGTAACAGTCGCCTAGTGCTGTTCTATGTGGAGTATCACACGCCCTGGTACCTGTTCGAGCTCTTCCCCTTCATCCTGCTGGGGGTCTTCGGGGGATTATGGGGCGCGTTCTTCATCCGGGCAAACATCGCCTGGTGCCGCCGACGCAAGTCCACTCGCTTCGgcaagTACCCAGTGCTGGAGGTGATCACGGTGGCGGCGATCACAGCGATTGTGGCGTTCCCGAACCCGTACACCCGTCAGAACACCAGCGAGCTGATCAAGGAGCTGTTCACAGACTGCGGGCCGCTGGAGTCGTCTCAGCTCTGCCAGTACCGCAGTCTGATGAACGGCAGCCAGGCCGACCCCACAGGCCCCGACACCGCCTCTGCCGCCACACCGGGGGTCTATTCAGCCATGTGGCAGCTCAGCCTCGCGCTCGTCTTCAAGATCATCATGACCATCTTCACCTTCGGCCTCAAGgtgCCGTCGGGTCTCTTCATCCCCAGTATGGCCATCGGGGCGATTGCGGGCAGGATTGTGGGCATTGCAGTGGAGCAGCTGGCGTATTATCATCACGACTGGTTTGTGTTCAGAGAGTGGTGTGAGGTCGGTGCTGACTGCATCACGCCGGGACTCTACGCCATGGTGGGAGCCGCCGCATGTCTGGGTGGCGTGACTCGTATGACCGTGTCTCTGGTGGTCATTGTTTTTGAGTTGACGGGCGGTCTTGAGTACATCGTCCCGCTGATGGCGGCAGTGATGACCAGTAAATGGGTGGGTGACGCGTTCGGCCGAGAGGGGATTTACGAAGCCCACATTCGCCTGAATGGATACCCTTTCCTGGACGCTAAAGAGGAGTTCACGCACACCACGCTAGCCAGAGAAGTCATGCGTCCACGGCGCAGTGACCCACCACTAGCAGTTCTGACGCAGGACGACATGACTCTCGCTGAACTGCAGGGCATCATCTCCGAAACCAGCTACAATGGCTTCCCTGTCATCGTCTCCAAAGAGTCCCAGAGGCTGGTGGGATTCGCCCTGCGCAGGGACATTACTATTGCTATAGaaAACGCCCGGCGTAAGCAGGAGGGCATCGTGCTGAACTCACGGGTGTACTTTACCCAGCATGCCCCAACGCTCCCTGCCGACAGCCCGCGGCCGCTAAAGCTGCGCAGCATTCTGGACATGAGCCCGTTCACCGTCACCGATCACACGCCCATGGAGATCGTGGTGGACATTTTCCGGAAGCTGGGCCTTCGCCAGTGCCTCGTGACCCATAATGGGATTGTATTGGGCATCATCACAAAGAAGAATATTTTAGAGCATCTGGAAGAGATCAAGCAGCACGTGGAGCCCTTGACGCCTCCTTGgtattattacaaaaaaagatATCCTCCGTCATATGGCCCAGATGGCAAACCAAGACCCCGAGTCCATAATGTTCAACTAGCGCCCTCCTCGTCCCATTACCAGGAGGACGAAATCGAAGAGGAGGTTCGATTACTGGACAATTCATCCCTCTGACCACACGCCCCCTACAGTTTCCCAAAGCTACACTACAACAACCCAAACACTACTCCAGATGTGGAGCCCGTCCTGGACACGTCCTCTGGGTACTTGCACAAGACTCCAGACTTAGAGGAAAAAGCCTGACGAGTAAAGTGGACGAACTTTCTCCAAATGCTAACATGCTAAACGTACTCTCTCCACACGCGCATGCTTAAACACGGTCAACTTCCACCCTCGGGATCTGCATATTTGACCTCTGAGCCTGAGGTAACACGTCCTGGAGAGGTGAAAGGTCAAGATGAACCGCTGGAAATGCGAGGAGGGACCTTCGCCGATACCAACCGAACTACATCCCAAATGCGGTACCATTGTTTACTTGTATTGTGTGCGAGAACGAAAGATCTTAATTTGGACGCCGGCGAAACCCAACATTCCAATCGGGAAACCGAAGAAGCGTCCTGAATTGCGTATTCAACACTGCGAGATGATCAAACGTTGGTTTTAGAGAAAGGATTTTTGGAAGAGCTTCAACTTGGACACTATTGACGGCCAGTCTAGACTGCACTGGGATTATAGGTAACGAGCcaaccatctctctctctctctctctctctcttttcgaGTGCCCAAACTTTGACTTTTTGTGCTTTCGGTTACTGGGAATGAAATTCAAAGacgttttattttttctgtttctgtaacAGCTGCTATCCTGgctatcatgtttaaaaaaatactaagcgacttttaatggtttattaaaatgtgacttgaccaacttttttttttttttttttttaagttcgcAAACAAGCGTAAATGTTCAACCTGGTAAACGTCGTCTCTAGTACTGTTAACATTCTCTGTGTCTGTCTGCGCATATTTCATCTTGTGAGAGTTATCTTTGTCCAACTGGTGATATTTCTGAAGGCCGACAATTAAACAGTTCACAATAGTGCCCTTTAACGATACATCATTACTTTTCACATACAAAAGTTAGCATTTTCATAATTTtgtgtgtattattttatatatatatatatatatatatatatatatatatatatatattataaatatatatatatatatattataaatatatatatatatatatagatattataaatattttatgtaaatgaaaaaactatgcatataaatgtttatttttatttacataaaaatatttaaaacataacattatatagaaaaatctaaatatttaataGTGTATGCATATATGCGTGTGCATTtatacacacgcatacatacacacacacacacatatatatatatatatatatatatatatatatatatatatatatatatatatatattaaataaatacacactttAATATTACACAAAATGTCTTGTTTCAACGTCCTGCCCAGGTACTACAGATGAAAACTAGCTTTATAGCTATCTCTGGCACATGTCATGATGTACGTtatccctgtataaataaatttattacgtaaaaacattttattttgtatgcgaTTAGTCTCGATTTATCGTTAAACAGCACGAGTTCACAATTTATTTGCACCTGAGAACtataagcataaataaacaaaaaacatctcAGTGTCATATTTCATCCCAAAATCACTTGATTGGGCTTTTTTTTGCCCCAAAATTATTCAACCCAAAAATCCtcattactgaaataaaagtgGCTAGCAAGATGAATATTTAGGGGTAGATTGTTCAAATGACTTAAGTGGTATAAATTAAAAGCTGTTCAACATCATTCGCACCCCATAGACACTAACGTCTCCATAGTCTGACACGTTTCGACCCTTATTCATGAAAATTTGGCATGTTTACACCATATTATGTTACATCCTTTTTATTGAGACCAATATGGTcataaatgttttgtgttcatGACATTTTTTCACAGAAAGCACAAAAATAAtacttattaataacaataataagtataataatataaatttattattattaataatttttgtgCATTCCAGAGAAAATTGTCATTAATAACCACACATATTtgaccataataataaaaaaacagcttttattttgataattgtctttgatattggggtgaaatatgaCACAGATTTTTTTGTGAGAGCATCAAACGATAATTAAATGCAGGGTACAGGTTATAAACTACCAGAAATGTCATTTTGGAGATGCCAAATGTTTTCAATTCGGTCTCGAGTGCACAGTTTTTATCATTGGTCCTGGAAAAGCGATGATGAAATGTGACTGTTAGAGACTGAAGCTCTAGTTCATTTGTGATTGCTGCTCTTGGCCCCttcggtttgtgtgtgtgtgtgtgtgtgtgtgtgttttatttttttgttcctgaGAAACACATTGCACAGTTTTACGCAAATTCTGAACACTTGTGGTGACCATTGCTGTGTCCCGTTCTGTATGTTAAACTGCACTACCAGCCGCACTGTCATCTCTGTTCTTCTGAAATTGATTTATCTTGATTCATTAGCATGTGATTCGTTTTCCAAAACAAGGCCGAAGTGTCGTCTCTTTAACAAATTGGTGACGTTCTGtccttttttttgctttgtttttatggtgACCGGCATTAGAACATCCCTCCCCCAAATGATTGACAGCTAATGAGCAGGTGTGGGCGGGGCCTGTGTTCTCATTAGCAGTTGATGTTCCTCTGTTCATCGATGAAGAAAACACaatgttgttatatatatattgatctcgttttttctttttatttatactAGTGCTAGAGTTGTACAATATGGAGAATTTTACGTATGATTGATGGTTTGATTgtacattaaacaaacaaatatgtaaagattaaattgttttaaatgaagtGCAAA
>TCONS_00065476
CGAAGTGACGCAATCACGCTCGTGTTCTCAAGCTCAGCGCTGTTGGTCATGGCCGCCGCTCCAGCGCGTCAGTGATCCGCGGATTCGTTTCCCCGGTATGGAGGAGGAATCCGCAGACCCGTATCTTCCCTACGACGGTGGCGGAGGAGACACGATCCCGCTGCAGGAGCTCAGCGGCAGAGgGTCGAACTACGCCATGTCTAATGGGGGTGGAGGAGGGGGAGGAGCTAGTAGCTCCACCCACCTGCTGGATCTGCTGGAAGAGCCCATTCCTGGAGTGGGGACCTACGACGACTTCCACACCATCGACTGGGTCCGAGAGAAATGCAAAGACAGAGAGCGACACCGCAAGATAAACAGCAAAAAGAAGGAGTCAGCATGGGAATTCACCAAGAGTCTCTACGACGCCTGGTCCGGCTGGCTGGTGGTCACACTGACAGGACTCGCatcagGAGCGTTAGCTGGCGGGATCGACATCGCCGCCGACTGGATGAACGACCTGAAGGAGGGCGTGTGTCTTAGTGCCATGTGGTTCAATCACGAGCAGTGCTGCTGGGGCTCCAACAAGACCACCTTCGCCGAGAGAGACAAGTGTCCTCAGTGGAAGACATGGGCCGAGCTGATCCTGGGTCAGGAACAGGGTCCCGGCTCGTACATCATGAACTACTTCATGTTCACCTTCTGGGCTTTGTCTTTCGCTTTTCTGGCCGTGTCTCTGGTGAAGGTGTTTGCGCCGTATGCCTGCGGCTCTGGAATACCTGAGATTAAAACCATCCTGAGTGGCTTCATCATCCGCGGGTACCTGGGCAAGTGGACTCTGATGATCAAGACCATCACTCTGGTTCTTGCTGTGGCGTCTGGCCTCAGTCTGGGAAAGGAGGGTCCGCTGGTTCACGTGGCCTGCTGCTGCGGGAACATCTTCTCATATCTCTTCCCCAAATACAGCAAGAACGAGGCTAAGAAGCGAGAGGTTCTGTCGGCGGCGTCGGCTGCTGGTGTTTCTGTGGCTTTTGGGGCTCCGATTGGAGGAGTTTTGTTCAGTCTGGAGGAGgtgagTTATTACTTCCCTCTGAAGACTCTGTGGCGCTCGTTCTTCGCTGCTCTGGTGGCTGCTTTTGTGCTGCGCTCCATCAACCCGTTCGGTAACAGTCGCCTAGTGCTGTTCTATGTGGAGTATCACACGCCCTGGTACCTGTTCGAGCTCTTCCCCTTCATCCTGCTGGGGGTCTTCGGGGGATTATGGGGCGCGTTCTTCATCCGGGCAAACATCGCCTGGTGCCGCCGACGCAAGTCCACTCGCTTCGgcaagTACCCAGTGCTGGAGGTGATCACGGTGGCGGCGATCACAGCGATTGTGGCGTTCCCGAACCCGTACACCCGTCAGAACACCAGCGAGCTGATCAAGGAGCTGTTCACAGACTGCGGGCCGCTGGAGTCGTCTCAGCTCTGCCAGTACCGCAGTCTGATGAACGGCAGCCAGGCCGACCCCACAGGCCCCGACACCGCCTCTGCCGCCACACCGGGGGTCTATTCAGCCATGTGGCAGCTCAGCCTCGCGCTCGTCTTCAAGATCATCATGACCATCTTCACCTTCGGCCTCAAGgtgCCGTCGGGTCTCTTCATCCCCAGTATGGCCATCGGGGCGATTGCGGGCAGGATTGTGGGCATTGCAGTGGAGCAGCTGGCGTATTATCATCACGACTGGTTTGTGTTCAGAGAGTGGTGTGAGGTCGGTGCTGACTGCATCACGCCGGGACTCTACGCCATGGTGGGAGCCGCCGCATGTCTGGGTGGCGTGACTCGTATGACCGTGTCTCTGGTGGTCATTGTTTTTGAGTTGACGGGCGGTCTTGAGTACATCGTCCCGCTGATGGCGGCAGTGATGACCAGTAAATGGGTGGGTGACGCGTTCGGCCGAGAGGGGATTTACGAAGCCCACATTCGCCTGAATGGATACCCTTTCCTGGACGCTAAAGAGGAGTTCACGCACACCACGCTAGCCAGAGAAGTCATGCGTCCACGGCGCAGTGACCCACCACTAGCAGTTCTGACGCAGGACGACATGACTCTCGCTGAACTGCAGGGCATCATCTCCGAAACCAGCTACAATGGCTTCCCTGTCATCGTCTCCAAAGAGTCCCAGAGGCTGGTGGGATTCGCCCTGCGCAGGGACATTACTATTGCTATAGaaAACGCCCGGCGTAAGCAGGAGGGCATCGTGCTGAACTCACGGGTGTACTTTACCCAGCATGCCCCAACGCTCCCTGCCGACAGCCC
>TCONS_00065477
ATGGAGGAGGAATCCGCAGACCCGTATCTTCCCTACGACGGTGGCGGAGGAGACACGATCCCGCTGCAGGAGCTCAGCGGCAGAGgGTCGAACTACGCCATGTCTAATGGGGGTGGAGGAGGGGGAGGAGCTAGTAGCTCCACCCACCTGCTGGATCTGCTGGAAGAGCCCATTCCTGGAGTGGGGACCTACGACGACTTCCACACCATCGACTGGGTCCGAGAGAAATGCAAAGACAGAGAGCGACACCGCAAGATAAACAGCAAAAAGAAGGAGTCAGCATGGGAATTCACCAAGAGTCTCTACGACGCCTGGTCCGGCTGGCTGGTGGTCACACTGACAGGACTCGCatcagGAGCGTTAGCTGGCGGGATCGACATCGCCGCCGACTGGATGAACGACCTGAAGGAGGGCGTGTGTCTTAGTGCCATGTGGTTCAATCACGAGCAGTGCTGCTGGGGCTCCAACAAGACCACCTTCGCCGAGAGAGACAAGTGTCCTCAGTGGAAGACATGGGCCGAGCTGATCCTGGGTCAGGAACAGGGTCCCGGCTCGTACATCATGAACTACTTCATGTTCACCTTCTGGGCTTTGTCTTTCGCTTTTCTGGCCGTGTCTCTGGTGAAGGTGTTTGCGCCGTATGCCTGCGGCTCTGGAATACCTGAGATTAAAACCATCCTGAGTGGCTTCATCATCCGCGGGTACCTGGGCAAGTGGACTCTGATGATCAAGACCATCACTCTGGTTCTTGCTGTGGCGTCTGGCCTCAGTCTGGGAAAGGAGGGTCCGCTGGTTCACGTGGCCTGCTGCTGCGGGAACATCTTCTCATATCTCTTCCCCAAATACAGCAAGAACGAGGCTAAGAAGCGAGAGGTTCTGTCGGCGGCGTCGGCTGCTGGTGTTTCTGTGGCTTTTGGGGCTCCGATTGGAGGAGTTTTGTTCAGTCTGGAGGAGgtgagTTATTACTTCCCTCTGAAGACTCTGTGGCGCTCGTTCTTCGCTGCTCTGGTGGCTGCTTTTGTGCTGCGCTCCATCAACCCGTTCGGTAACAGTCGCCTAGTGCTGTTCTATGTGGAGTATCACACGCCCTGGTACCTGTTCGAGCTCTTCCCCTTCATCCTGCTGGGGGTCTTCGGGGGATTATGGGGCGCGTTCTTCATCCGGGCAAACATCGCCTGGTGCCGCCGACGCAAGTCCACTCGCTTCGgcaagTACCCAGTGCTGGAGGTGATCACGGTGGCGGCGATCACAGCGATTGTGGCGTTCCCGAACCCGTACACCCGTCAGAACACCAGCGAGCTGATCAAGGAGCTGTTCACAGACTGCGGGCCGCTGGAGTCGTCTCAGCTCTGCCAGTACCGCAGTCTGATGAACGGCAGCCAGGCCGACCCCACAGGCCCCGACACCGCCTCTGCCGCCACACCGGGGGTCTATTCAGCCATGTGGCAGCTCAGCCTCGCGCTCGTCTTCAAGATCATCATGACCATCTTCACCTTCGGCCTCAAGgtgCCGTCGGGTCTCTTCATCCCCAGTATGGCCATCGGGGCGATTGCGGGCAGGATTGTGGGCATTGCAGTGGAGCAGCTGGCGTATTATCATCACGACTGGTTTGTGTTCAGAGAGTGGTGTGAGGTCGGTGCTGACTGCATCACGCCGGGACTCTACGCCATGGTGGGAGCCGCCGCATGTCTGGGTGGCGTGACTCGTATGACCGTGTCTCTGGTGGTCATTGTTTTTGAGTTGACGGGCGGTCTTGAGTACATCGTCCCGCTGATGGCGGCAGTGATGACCAGTAAATGGGTGGGTGACGCGTTCGGCCGAGAGGGGATTTACGAAGCCCACATTCGCCTGAATGGATACCCTTTCCTGGACGCTAAAGAGGAGTTCACGCACACCACGCTAGCCAGAGAAGTCATGCGTCCACGGCGCAGTGACCCACCACTAGCAGTTCTGACGCAGGACGACATGACTCTCGCTGAACTGCAGGGCATCATCTCCGAAACCAGCTACAATGGCTTCCCTGTCATCGTCTCCAAAGAGTCCCAGAGGCTGGTGGGATTCGCCCTGCGCAGGGACATTACTATTGCTATAGaaAACGCCCGGCGTAAGCAGGAGGGCATCGTGCTGAACTCACGGGTGTACTTTACCCAGCATGCCCCAACGCTCCCTGCCGACAGCCCGCGGCCGCTAAAGCTGCGCAGCATTCTGGACATGAGCCCGTTCACCGTCACCGATCACACGCCCATGGAGATCGTGGTGGACATTTTCCGGAAGCTGGGCCTTCGCCAGTGCCTCGTGACCCATAATGGGATTGTATTGGGCATCATCACAAAGAAGAATATTTTAGAGCATCTGGAAGAGATCAAGCAGCACGTGGAGCCCTTGACGCCTCCTTGgtattattacaaaaaaagatATCCTCCGTCATATGGCCCAGATGGCAAACCAAGACCCCGAGTCCATAATGTTCAACTAGCGCCCTCCTCGTCCCATTACCAGGAGGACGAAATCGAAGAGGAGGTTCGATTACTGGACAATTCATCCCTCTGA
>TCONS_00065480
GGCATCATCTCCGAAACCAGCTACAATGGCTTCCCTGTCATCGTCTCCAAAGAGTCCCAGAGGCTGGTGGGATTCGCCCTGCGCAGGGACATTACTATTGCTATAGaaAACGCCCGGCGTAAGCAGGAGGGCATCGTGCTGAACTCACGGGTGTACTTTACCCAGCATGCCCCAACGCTCCCTGCCGACAGCCCGCGGCCGCTAAAGCTGCGCAGCATTCTGGACATGAGCCCGTTCACCGTCACCGATCACACGCCCATGGAGATCGTGGTGGACATTTTCCGGAAGCTGGGCCTTCGCCAGTGCCTCGTGACCCATAATGGGTGAGTGTCCGGCGGGATGACATGCGTTTGACATGCATCTGAACTAACGTAACAAACGTCCCAtcagcagacacacactcacacacacacactagagatgGGCGATATGGACTAAATCACAATATTTTCTAGTATTTATAGCGATATCAGTGATGATAATTCATGCGTACAGCTGAGGTCagcattattttatctttgacatgatgacagtacataatatttgactagatattcttcaagacacttctatacagcttaaagtgacatttcaaggcttaattaggttaagttgGTGTAATTCAGGATATCTGCaag
>TCONS_00065481
GGATTGTATTGGGCATCATCACAAAGAAGAATATTTTAGAGCATCTGGAAGAGATCAAGCAGCACGTGGAGCCCTTGATCGATGACATCTGACCCCTCGCGCAGCTCCGCCCCCTAAACCATTGACGCCTCCTTGgtattattacaaaaaaagatATCCTCCGTCATATGGCCCAGATGGCAAACCAAGACCCCGAGTCCATAATGTTCAACTAGCGCCCTCCTCGTCCCATTACCAGGAGGACGAAATCGAAGAGGAGGTTCGATTACTGGACAATTCATCCCTCTGACCACACGCCCCCTACAGTTTCCCAAAGCTACACTACAACAACCCAAACACTACTCCAGATGTGGAGCCCGTCCTGGACACGTCCTCTGGGTACTTGCACAAGACTCCAGACTTAGAGGAAAAAGCCTGACGAGTAAAGTGGACGAACTTTCTCCAAATGCTAACATGCTAAACGTACTCTCTCCACACGCGCATGCTTAAACACGGTCAACTTCCACCCTCGGGATCTG

Function

symbol description
clcn3 Predicted to enable solute:proton antiporter activity and voltage-gated chloride channel activity. Predicted to act upstream of or within chloride transport and transmembrane transport. Predicted to be located in early endosome membrane; late endosome membrane; and lysosomal membrane. Predicted to be integral component of membrane. Predicted to be active in Golgi apparatus; early endosome; and synaptic vesicle. Predicted to be integral component of plasma membrane. Is expressed in several structures, including eye; female organism; heart; liver; and pleuroperitoneal region. Orthologous to human CLCN3 (chloride voltage-gated channel 3).

GO:

id name namespace
GO:0055085 transmembrane transport biological_process
GO:0006811 ion transport biological_process
GO:0006821 chloride transport biological_process
GO:0005768 endosome cellular_component
GO:0005769 early endosome cellular_component
GO:0005794 Golgi apparatus cellular_component
GO:0005886 plasma membrane cellular_component
GO:0005887 integral component of plasma membrane cellular_component
GO:0008021 synaptic vesicle cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0015299 solute molecular_function
GO:0005247 voltage-gated chloride channel activity molecular_function
GO:0031404 chloride ion binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-030131-1699 Predicted to enable solute:proton antiporter activity and voltage-gated chloride channel activity. Predicted to act upstream of or within chloride transport and transmembrane transport. Predicted to be located in early endosome membrane; late endosome membrane; and lysosomal membrane. Predicted to be integral component of membrane. Predicted to be active in Golgi apparatus; early endosome; and synaptic vesicle. Predicted to be integral component of plasma membrane. Is expressed in several structures, including eye; female organism; heart; liver; and pleuroperitoneal region. Orthologous to human CLCN3 (chloride voltage-gated channel 3).

Ensembl:

ensembl_id ENSDARG00000003269

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00065475 False 5596 mRNA 0.45 15 7511914 7643941
TCONS_00065476 False 2277 mRNA 0.58 12 7552008 7624101
TCONS_00065477 False 2550 mRNA 0.57 14 7552105 7641101
TCONS_00065480 False 638 lncRNA 0.49 2 7618036 7624545
TCONS_00065481 True 518 mRNA 0.50 3 7630409 7641330

Neighbor

gene id symbol gene type direction distance location
XLOC_033448 nit1 coding upstream 3167 7495034 ~ 7508747 (+)
XLOC_033447 BX324230.2 coding upstream 16027 7469762 ~ 7495887 (+)
XLOC_033446 NA coding upstream 88991 7420212 ~ 7422923 (+)
XLOC_033445 si:ch211-168d1.3 coding upstream 138855 7279903 ~ 7373059 (+)
XLOC_033444 NA coding upstream 232018 7275851 ~ 7279896 (+)
XLOC_033452 ino80b coding downstream 52724 7696665 ~ 7707218 (+)
XLOC_033453 CABZ01030292.1 coding downstream 128224 7772165 ~ 7772378 (+)
XLOC_033454 CABZ01030291.2 coding downstream 135022 7778963 ~ 7779176 (+)
XLOC_033455 CABZ01030282.1 coding downstream 198010 7841951 ~ 7855635 (+)
XLOC_033456 si:dkey-185m8.2 coding downstream 680565 8324506 ~ 8341388 (+)
XLOC_033443 NA non-coding upstream 236526 7265682 ~ 7275388 (+)
XLOC_033435 CU459024.1 non-coding upstream 813823 6697973 ~ 6698091 (+)
XLOC_033429 NA non-coding upstream 1259253 6249392 ~ 6252661 (+)
XLOC_033457 NA non-coding downstream 700778 8344719 ~ 8352307 (+)
XLOC_033460 CR382283.1 non-coding downstream 785013 8428954 ~ 8429919 (+)
XLOC_033463 NA non-coding downstream 980004 8623945 ~ 8626684 (+)

Expression


Co-expression Network