XLOC_033446


Basic Information

Item Value
gene id XLOC_033446
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007118.7
NCBI id CM002891.2
chromosome length 74282399
location 7420212 ~ 7422923 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00068774
GGACAACCAACGGCCTGAACGACTATATGAATGACTATATAGCTGACCGGTTATATAACGGAGCGACTGGATTCTCGGTAGGACGAATTCTCTGGGGATTATGCGCCTCGGTCATTAGCCTCTTAGCAGGGGGTTTGCTGTTCACGGAGGACACCGACTGGATGATCAGATTGTTAGACtcactaactgactgactgacacagACTTCATTTCATTGTGCTGGATAAATGGACCTATTATGGAAACGACCCAGTCAGTGAAAACTGCTCTGCGCCTCCATATTTATGCTTTTTCTCTGTCCACATTGGTGTGTATTTGCGTCTGCGCTCAGGATCTGTGTGTGTGATAAACAGACTCTGCAGTCAGAAGGTAAATGGACCAAAGGCCGCTGGTGTTGTCGTACCGCCTTTAATTGGGATTTGATGTGAGAGAAGCGCTTAGGCCATGGAAATCGCTATCACATGCCGCTCCGAGGAGACGTTTTCAGATGCATGTTGCCTAAATCGCTTCAGAATCCACCACAATCCCGACCGCCTAATACCTCCTTAATTAATCTGGACATGGTTATATGCTCTCCTCTGTGACCCAACACCAGCTCACCTTATTACA

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00068774 True 609 lncRNA 0.47 3 7420212 7422923

Neighbor

gene id symbol gene type direction distance location
XLOC_033445 si:ch211-168d1.3 coding upstream 47153 7279903 ~ 7373059 (+)
XLOC_033444 NA coding upstream 140316 7275851 ~ 7279896 (+)
XLOC_033443 NA coding upstream 144824 7265682 ~ 7275388 (+)
XLOC_033442 gal3st3 coding upstream 170423 7151832 ~ 7249789 (+)
XLOC_033440 actn3b coding upstream 286737 6969909 ~ 7133475 (+)
XLOC_033447 BX324230.2 coding downstream 46839 7469762 ~ 7495887 (+)
XLOC_033448 nit1 coding downstream 72111 7495034 ~ 7508747 (+)
XLOC_033449 clcn3 coding downstream 88991 7511914 ~ 7643941 (+)
XLOC_033450 NA coding downstream 131837 7554760 ~ 7563288 (+)
XLOC_033451 si:ch211-42c5.5 coding downstream 147778 7570701 ~ 7575010 (+)
XLOC_033435 CU459024.1 non-coding upstream 722121 6697973 ~ 6698091 (+)
XLOC_033429 NA non-coding upstream 1167551 6249392 ~ 6252661 (+)
XLOC_033428 NA non-coding upstream 1362850 6053845 ~ 6057362 (+)
XLOC_033453 CABZ01030292.1 non-coding downstream 349242 7772165 ~ 7772378 (+)
XLOC_033454 CABZ01030291.2 non-coding downstream 356040 7778963 ~ 7779176 (+)
XLOC_033457 NA non-coding downstream 921796 8344719 ~ 8352307 (+)
XLOC_033460 CR382283.1 non-coding downstream 1006031 8428954 ~ 8429919 (+)

Expression


Co-expression Network